| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1347618 | 265 (1.130) | 3 (0.010) | 3/136 | 18.3 | 1.2% | coding (859/1128 nt) | yciW | predicted oxidoreductase |
| ? | REL606 | = 1347850 | 264 (1.250) | coding (627/1128 nt) | yciW | predicted oxidoreductase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 296 total aligned reads displayed.
GCAAAGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGATGTCCA > REL606/1347775‑1347925 | gCAAAGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTAtt < 2:4365489/76‑1 (MQ=255)gCAAAGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTAtt < 1:6712376/76‑1 (MQ=255) cAAAGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTg > 1:6457563/1‑76 (MQ=255) cAAAGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTg < 1:1798730/76‑1 (MQ=255) cAAAGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTg < 1:6601051/76‑1 (MQ=255) aaaGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGa < 1:1848094/76‑1 (MQ=255) aGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGAtt < 1:6104761/76‑1 (MQ=255) aGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGAtt < 1:1459046/76‑1 (MQ=255) aGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGAtt > 2:2271940/1‑76 (MQ=255) ttCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATtca > 2:1929223/1‑76 (MQ=255) ttCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATtca < 1:3506672/76‑1 (MQ=255) tCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATtcat < 2:505705/76‑1 (MQ=255) tCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATtcat > 1:2692986/1‑76 (MQ=255) tGCCGTTGCACTTTTTGTGTAATCTTCGGGTAGTTTTTCCTCCTCATAGCTGCTTCGCCAGCGTATTGATtcatca < 2:3459488/76‑1 (MQ=255) tGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATtcatca < 2:3016551/76‑1 (MQ=255) tGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATtcatca < 2:1814915/76‑1 (MQ=255) tGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATtcatca < 2:4143677/76‑1 (MQ=255) cAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGt > 1:330221/1‑76 (MQ=255) gTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCCCCTCTTAGCTGCTTCGCCAGCGTATTGATTCATCAGTaa < 2:4031786/76‑1 (MQ=255) ttGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTaaa < 1:5600396/76‑1 (MQ=255) ttGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTaaa > 1:5291963/1‑76 (MQ=255) tGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAAc < 1:4287571/76‑1 (MQ=255) tGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAAc < 2:7683615/76‑1 (MQ=255) gAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACa > 1:490018/1‑76 (MQ=255) aCTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGt < 1:7554059/76‑1 (MQ=255) aCTTTTTGTGTAATCTTCAGGTAGTTTTTAGACCTCATAGATGCTTCGCCAGCGGATTGATTCATCAGGAAACAGt > 2:799959/1‑76 (MQ=255) cTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTg < 2:3330501/76‑1 (MQ=255) tttttGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGa < 1:5387468/76‑1 (MQ=255) ttttGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGAc < 2:7163673/76‑1 (MQ=255) tttGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGAcg < 1:7246721/76‑1 (MQ=255) gtAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCg < 2:4585071/76‑1 (MQ=255) gtAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCg < 2:2562370/76‑1 (MQ=255) tAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCgg > 2:3851143/1‑76 (MQ=255) aaTCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGc < 1:4504063/76‑1 (MQ=255) aTCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCCCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCa < 1:6271690/76‑1 (MQ=255) cTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATa > 1:2347276/1‑76 (MQ=255) cTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATa < 2:3083716/76‑1 (MQ=255) cTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATa > 1:5696572/1‑76 (MQ=255) ttCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAg > 2:4812129/1‑76 (MQ=255) ttCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAg > 1:2182386/1‑76 (MQ=255) ttCAGGTAGTTTTGCCACCCCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAg < 2:452055/76‑1 (MQ=255) tCAGTTAGTTTTTCCTCCGTATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAga < 2:5252754/76‑2 (MQ=255) tCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGt < 1:98147/76‑1 (MQ=255) cAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGtt > 1:1911789/1‑76 (MQ=255) cAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGtt > 1:3904931/1‑76 (MQ=255) aGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGttt < 1:29341/76‑1 (MQ=255) aGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGttt > 2:6113684/1‑76 (MQ=255) ggTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGtttt < 2:2351524/76‑1 (MQ=255) ggTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGtatt > 2:5796428/1‑76 (MQ=255) gTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTg < 1:7446886/76‑1 (MQ=255) tAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGt > 1:4045691/1‑76 (MQ=255) tAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGt < 2:4393299/76‑1 (MQ=255) aGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTa > 1:5860004/1‑76 (MQ=255) gTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTAt > 2:5964938/1‑76 (MQ=255) ttttCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTAtct < 1:2513307/76‑1 (MQ=255) ttttCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTAtct < 2:2098159/76‑1 (MQ=255) tttCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTAtctc > 2:5677775/1‑76 (MQ=255) tttCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTAtctc > 1:1053357/1‑76 (MQ=255) ccACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAg > 2:7355605/1‑76 (MQ=255) cACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCTGa > 2:5439786/1‑76 (MQ=255) cACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGa < 2:4331895/76‑1 (MQ=255) cACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGa < 2:5131451/76‑1 (MQ=255) aCCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGAc < 2:1283387/76‑1 (MQ=255) ccTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGAcc > 1:2849979/1‑76 (MQ=255) tCATAGCTGCTTCCCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCgg < 2:4911661/76‑1 (MQ=255) cATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCggg < 2:6804363/76‑1 (MQ=255) cATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCggg > 2:619869/1‑76 (MQ=255) aTAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGt > 1:6893403/1‑76 (MQ=255) tAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTa > 2:1466791/1‑76 (MQ=255) tAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTa < 1:2215656/76‑1 (MQ=255) tAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTa < 1:5046315/76‑1 (MQ=255) aggtgctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTaa < 2:6986298/73‑1 (MQ=255) aGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTaa < 2:4992565/76‑1 (MQ=255) aGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTaa > 1:2708573/1‑76 (MQ=255) aGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTaa > 1:3583827/1‑76 (MQ=255) ctgctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAAcc < 1:4699943/76‑1 (MQ=255) tgctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCa < 1:3001756/76‑1 (MQ=255) tgctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCa > 1:7030687/1‑76 (MQ=255) tgctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCa < 1:118661/76‑1 (MQ=255) tgctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCa > 2:6693771/1‑76 (MQ=255) tgctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCa > 2:29197/1‑76 (MQ=255) tgctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCa > 2:3153247/1‑76 (MQ=255) gctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAg > 1:7209658/1‑76 (MQ=255) ctTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGc > 1:5147874/1‑76 (MQ=255) tCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGt > 1:6934638/1‑76 (MQ=255) tCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGt < 1:3344194/76‑1 (MQ=255) tCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGt > 1:7698644/1‑76 (MQ=255) cGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTa < 1:1716463/76‑1 (MQ=255) ccAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTAcc < 2:1864098/76‑1 (MQ=255) aGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCgg > 2:4262696/1‑76 (MQ=255) aGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCgg > 1:5777867/1‑76 (MQ=255) cGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGAt < 2:633851/76‑1 (MQ=255) cGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGAt > 2:6451892/1‑76 (MQ=255) cGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGAt < 2:3636156/76‑1 (MQ=255) cGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGAt < 2:1700379/76‑1 (MQ=255) cGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGAt < 1:2405824/76‑1 (MQ=255) gTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGATg < 1:4151158/76‑1 (MQ=255) tATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGATGt > 1:3092317/1‑76 (MQ=255) ttGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGATGTcc < 1:1355528/76‑1 (MQ=255) tGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGATGTCCa < 1:1107370/76‑1 (MQ=255) | GCAAAGTTCTGCAGTTGAACTTTTTGTGTAATCTTCAGGTAGTTTTTCCACCTCATAGCTGCTTCGCCAGCGTATTGATTCATCAGTAAACAGTGACGCGTCGGCATAGTTTTGTATCTCCAGACCGGGTAACCAGCGTACCGGATGTCCA > REL606/1347775‑1347925 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |