| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2103888 = | 75 (0.310) | 39 (0.260) | 25/96 | 6.0 | 58.4% | coding (155/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | = 2103891 | 8 (0.050) | coding (158/216 nt) | ECB_01992 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 151 total aligned reads displayed.
TTCTTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2103989‑2103888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctggctggctggctggct‑ggctgGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT < REL606/2103891‑2103817 TTCTTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGC < 1:5390290/76‑1 TCTTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCT < 1:5752160/76‑1 CTTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTG < 2:6221187/76‑1 TTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGG > 2:3131234/1‑76 TTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGG > 2:2026670/1‑76 TTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGG > 1:2536450/1‑76 TTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGC > 1:6192111/1‑76 TTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGG > 1:5410896/1‑76 TTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGG < 1:5058639/76‑1 TTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGG > 2:3601786/1‑76 TAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGC > 2:3654664/1‑76 AGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTCGTACAAAATCCACATTCACACATGGCTGGCTGGCT > 2:5559229/1‑76 AGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCT > 1:3387178/1‑76 GTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTG > 1:7414632/1‑76 TGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGG > 1:6125615/1‑76 GTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGC < 2:2414385/76‑1 TTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCT > 1:1702623/1‑76 GCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGGTGG > 1:4311131/1‑76 GCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGG > 1:1607870/1‑76 CTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGgt > 1:3554761/1‑74 CTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCT < 1:7573421/76‑1 CTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCT > 2:200578/1‑76 TTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGG > 1:161388/1‑76 TTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGg > 1:3026587/1‑75 ATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑G > 2:3970532/1‑76 AGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGGTGGCTGGCATGCT‑GGC > 2:7344335/1‑76 AGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑Gtg > 2:6528537/1‑74 AGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGC < 1:2707269/76‑1 GTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTTGCT‑GGCT < 2:5852588/76‑1 GTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT < 2:7570680/76‑1 GTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT < 1:6135267/76‑1 TATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTG < 2:7778050/76‑1 TAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGGTGGCT‑GGGTGGg > 1:4445269/1‑75 TAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGg > 1:5437819/1‑75 AGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTTGCTGGCTGGCTGGCT‑GGCTGGCTGTGA < 2:316106/76‑1 GGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAA < 1:874249/76‑1 GCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAAT < 2:5790970/76‑1 ATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTA < 1:7229255/76‑1 TTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAA < 2:5669272/76‑1 TATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAAT < 1:982450/76‑1 ATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATG < 1:4168855/76‑1 ATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATG < 2:6399347/76‑1 CGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAA < 2:4332680/76‑1 GTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAAT < 2:2898388/76‑1 GTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTATGAAATCTAATGTAAATTTC < 2:4558389/76‑1 TACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGGTGGGCGGGCTGTGAAAACTAATGCAAATTTa > 2:3608518/1‑75 ATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTT < 2:1521059/76‑1 TCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTT < 2:7014581/76‑1 CCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTA < 1:5389385/76‑1 CCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTA < 2:3285523/76‑1 ATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATT < 2:2625771/76‑1 CACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAG < 2:7101139/76‑1 ACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGT < 2:1157071/76‑1 ACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGT < 2:3882698/76‑1 ACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGT < 1:450996/76‑1 ACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGT < 1:1702906/76‑1 CCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTC < 1:200578/76‑1 CTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCA < 1:2620995/76‑1 GCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATA < 1:298705/76‑1 CTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAA < 1:1768988/76‑1 CTGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAA < 1:684043/76‑1 TGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGGAATTTAATGCAAAATTTACCCCCTTATATTCGAAGTCAATAAa > 1:1255352/1‑75 TGGCTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAgc < 1:3338605/76‑3 CTGGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAA < 1:1308988/76‑1 GGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATTTAATGCAAATTTTACCCCTTTTTATTCGAAATCAATAACGAAGC > 1:1270144/1‑76 GGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGC < 2:7857884/76‑1 GGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGC < 2:1607870/76‑1 GGCTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGC < 1:1381109/76‑1 CTGGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAG < 1:5107521/76‑1 TGGCTGGCTGGCT‑GGCTGGCTGTGAAAACTAATGCCAATTTTACCCCCTTATATTCGAAATCAATAAACAAGCAGT > 2:4029336/1‑76 GGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCGCCCCTTTATATTCGAAGTCAATAACGAAGCAGTT < 2:7240896/76‑1 GGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTTGAAGTCAATAACGAAGCAGTT > 1:7580280/1‑76 GGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTT < 2:6215596/76‑1 GGCTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTT < 2:1423600/76‑1 CTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTT < 2:7459005/76‑1 CTGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTT > 2:5285303/1‑76 TGGCTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTC < 1:6795143/76‑1 CTGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATT > 2:3338317/1‑76 TGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTG < 1:2910600/76‑1 TGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTG < 1:5955464/76‑1 TGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTG < 1:4306365/76‑1 TGGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTG > 2:2879970/1‑76 GGCT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGT < 2:6014110/76‑1 CT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTAT > 2:5005874/1‑76 CT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTAT > 1:6428056/1‑76 CT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCAT < 1:1750677/71‑1 CT‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCAT > 2:1750677/1‑71 T‑GGCTGGCTGTGACATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATA > 2:6127315/1‑76 T‑GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATA > 2:910397/1‑76 GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAG < 2:47443/76‑1 GGCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAG < 2:2390280/76‑1 GCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGC > 1:7828993/1‑76 GCTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGC < 2:1499639/76‑1 CTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCC > 2:5308889/1‑76 CTGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCC > 1:870918/1‑76 TGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCA < 1:561784/76‑1 TGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCA < 1:7781897/76‑1 TGGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCA > 2:2571866/1‑76 GGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT > 1:5809380/1‑76 GGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT > 1:2050482/1‑76 TTCTTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2103989‑2103888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctggctggctggctggct‑ggctgGCTGTGAAATCTAATGCAAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT < REL606/2103891‑2103817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |