| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2015709 = | 188 (0.780) | 8 (0.040) | 6/134 | 16.3 | 3.8% | coding (260/1059 nt) | yeeE | predicted inner membrane protein |
| ? | REL606 | 4217041 = | 242 (1.130) | coding (476/2097 nt) | yjbH | predicted porin | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 197 total aligned reads displayed.
GCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCG > REL606/2015634‑2015784 | gcgATCTAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCAGCCAGAACAATTc > 2:655835/1‑76 (MQ=255)gcaaTCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCCCCCGCCAGAACAATTc < 2:7813156/73‑1 (MQ=255) cgATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTcc > 1:7255448/1‑76 (MQ=255) gccccACCTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCCCCCGCCAGAACAATTccc < 2:791910/73‑1 (MQ=255) acccACCTGCCGATCAATCCCTCCCCCGCGCGATACCAGGTCCCGGTGGCACACCCCCCCGCCAGAACAATTCCCa < 2:4900253/74‑1 (MQ=255) aTCCACCTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCCCCCGCCAGAACAATTCCCa < 1:4884299/76‑1 (MQ=255) aTCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCa > 2:896614/1‑76 (MQ=255) aTCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCa > 2:4506334/1‑76 (MQ=255) tCCACCTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCCCCCGCCAGAACAATTCCCAg < 2:3341449/76‑1 (MQ=255) tCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAg > 2:6389098/1‑76 (MQ=255) tCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAg > 1:5186185/1‑76 (MQ=255) cccACCTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCCCCCGCCAGAACAATTCCCAg < 2:4674412/75‑1 (MQ=255) ccAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGc > 1:1006457/1‑76 (MQ=255) ccAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGc > 2:5388326/1‑76 (MQ=255) cAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGcc > 2:844948/1‑76 (MQ=255) ccTGCCGATCAATCCCTCCCCCGCGCGATCCCAGGTCCCGGTGGCACACCCCCCCGCCAGAACAATTCCCAGCCCg < 2:1237047/75‑1 (MQ=255) cTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGa > 2:6655461/1‑76 (MQ=255) tGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCAGCCAGAACAATTCCCAGCCCGaa > 1:1695653/1‑76 (MQ=255) tGCCGATCAATCCCCCCCCCGCGCGATACCAGGTCCCGGTGCCACACCCCCCCGCCAGAACAATTCCCAGCCCGaa < 1:6669928/76‑1 (MQ=255) gCCGATCAATCCCTCCCCCGCGCGATACCAGGCCCCGGTGGCACATCCCCCCGCCAGAACAATTCCCAGCCCGaaa < 1:3926678/76‑1 (MQ=255) gCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGaaa > 1:5968941/1‑76 (MQ=255) gCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGaaa > 1:2481803/1‑76 (MQ=255) ccGATCAATCCCTCACCCGCGCGATACCAGGCCCCGGTGGCCCATCCCCCCGCCAGAACAATTCCCAGCCCGaaaa < 2:2411477/76‑1 (MQ=255) ccGACCAACCCCCCCCCCGCGCGATCCCAGGTCCCGGTGGCACACCCCCCCGCCAGAACAATTCCCAGCCCGaaaa < 1:2108355/76‑1 (MQ=255) cGATCAATCCCTCCCCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAg < 2:1899273/76‑1 (MQ=255) cGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAg > 2:3043255/1‑76 (MQ=255) taTCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGa > 2:3807197/2‑76 (MQ=255) gaccAACCCCCCACCCGCGCGATACCAGGTCCCGGTGGCACATCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGa < 1:5304326/73‑1 (MQ=255) gATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGa > 1:7309881/1‑76 (MQ=255) aTCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGAt > 2:2995360/1‑76 (MQ=255) aTCAACCCCCCCCCCGCGCGATCCCAGGTCCCGGTGCCACATCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGAt < 1:889366/76‑1 (MQ=255) tCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGACAAGATa > 2:3993601/1‑76 (MQ=255) tCAACCCCTCCCCCGCGCGATACCGGGTCCGGGTGGCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATa < 2:6318535/76‑1 (MQ=255) cAATCCCTCCCCCGCGCGATGCCAGGTCCGGGTGGCACATCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATAc < 1:3401583/76‑1 (MQ=255) cAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATAc > 1:4037196/1‑76 (MQ=255) cAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATAc > 2:208283/1‑76 (MQ=255) aaTCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATAcc > 2:5894662/1‑76 (MQ=255) aTCCCTCGCCCGCGCGATACCAGGTCCCGGTGGCACATCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATAccc < 2:3826888/76‑1 (MQ=255) aTCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATAccc > 2:3741574/1‑76 (MQ=255) aTCCCACCCCCGCGCGTTCCCGGGTCCCGGTGCCCCACCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATAccc < 1:2995360/76‑1 (MQ=255) tCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACACCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCa < 2:1112068/76‑1 (MQ=255) tcTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCAAcc > 2:2916287/2‑76 (MQ=255) ccccACCCGCGCGATCCCAGGCCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCAcc < 1:1918442/73‑1 (MQ=255) ctctCCCGCGCCCTGCCAGCTCGCGATAGCACAACCCCCCGCCAGAACAATTCCCAGCCTGAAAAGATACCCCCCt < 2:7348066/76‑1 (MQ=255) cTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCt > 2:3796541/1‑76 (MQ=255) cTCACCCGCGCGATACCAGGCCCCGGTGGCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCt < 1:2176607/76‑1 (MQ=255) tcccccGCGCGATGCCAGAGCCCGTGGTCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCta < 2:7407372/73‑1 (MQ=255) tCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCta > 1:7841961/1‑76 (MQ=255) tCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCta > 2:5526353/1‑76 (MQ=255) cccccGCGCGATACCAGGCCCCGGTGCCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCtat < 1:1825917/74‑1 (MQ=255) ccccGCGCGATCCCGGGCCCGGGTGCCCCACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCtata < 2:717475/75‑1 (MQ=255) ccccGCGCAATCCCAGGCCCCGGTGGCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCtata < 1:1555259/75‑1 (MQ=255) cccGCGCGATACCAGGCCCCGGGGGCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATaa < 1:7786719/76‑1 (MQ=255) ccGCGCAATCCCAGGCCCCGGTGCCACACCCCCCCGCCAGAACAATTCCCAGCCCAAAAAGATACCCACCTATAAc < 1:4818444/76‑1 (MQ=255) gcgcgATCCCAGGCCCCGGTGGCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAg < 2:1016449/76‑1 (MQ=255) cgctATACCGGGCCCCGGTGGCACCTCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATCCCCACCTATAACAGt < 2:5606637/76‑1 (MQ=255) cgcgATCCCGGGTCCGGGGGCCACCCCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGt < 1:4306277/76‑1 (MQ=255) cgcgATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGt > 2:2631512/1‑76 (MQ=255) gcgATCCCGGGCCCCGGTGCCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTa < 1:5683352/76‑1 (MQ=255) gcgATACCAGTTCCGGGGGCCACCACCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATCCCCACCTATAACAGTa < 2:2268688/76‑1 (MQ=255) cgATACCGGGCCCGGGTGGCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTAc < 2:1430929/76‑1 (MQ=255) cgATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTAc > 1:5499884/1‑76 (MQ=255) cgATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACACACCTATAACAGTAc > 1:5984500/1‑76 (MQ=255) gATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTAcc > 1:5593514/1‑76 (MQ=255) aCCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAg > 1:3322024/1‑76 (MQ=255) aCCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAg > 2:649299/1‑76 (MQ=255) cAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGcc > 1:1279083/1‑76 (MQ=255) cAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGcc > 1:4639488/1‑76 (MQ=255) cAGGTCCCGGTGCCACACCCCCCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGcc < 1:6539124/76‑1 (MQ=255) ccGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGa > 2:1299256/1‑76 (MQ=255) ggTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAAc > 2:5256728/1‑76 (MQ=255) tGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGaaaga > 1:7548531/1‑73 (MQ=255) tGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGc > 1:1401056/1‑76 (MQ=255) tGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGc > 1:3679354/1‑76 (MQ=255) acaTCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCg > 2:6835354/1‑76 (MQ=255) acaTCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCAACGGGAACGCCCCg > 1:1970349/1‑76 (MQ=255) caTCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCgg > 2:4192807/1‑76 (MQ=255) ccccccGCTATAACAATTCCCAGCCCAAAAAGATCCCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCtt < 2:5970111/73‑1 (MQ=255) ccACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCAACGGGAACGCCCCGGCtt > 2:1253843/1‑76 (MQ=255) cccccGCCAAAACAATCCCCACCCCGAAAAGATCCCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTc < 1:7082569/74‑1 (MQ=255) ccccGCCAGAACAATCCCCAGCCCGAAAAGATCCCCCCCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCg < 1:1616398/75‑1 (MQ=255) cccGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGt > 2:4765831/1‑76 (MQ=255) ccAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGt > 1:2519/1‑76 (MQ=255) ccAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGt > 1:3187702/1‑76 (MQ=255) cAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTc > 2:7617032/1‑76 (MQ=255) aaaaCATTCCCAAGCCGAAAAAAATCCCCCCCTATAACAGTCCCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCa < 2:2503749/74‑1 (MQ=255) aGAACAATCCCCAGCCCAAAAAGATACCCCCCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCa < 2:4821316/76‑1 (MQ=255) aaCATTCCCCACCCAAAAAAGATCCCCCCCTAAAACAGTACCAAGCCATGGGAACGCCCCGGCTTCGTAAGTCAGt < 1:4133059/76‑1 (MQ=255) aaaaTCCCCACCCAAAAAAGATCCCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTa < 1:5077523/74‑1 (MQ=255) aCAATTCACACCCCAAAAAGACACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTa < 1:7659526/76‑1 (MQ=255) cAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAg > 1:3846567/1‑76 (MQ=255) cAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAg > 2:4591555/1‑76 (MQ=255) aaTTCCCACCCCGAAAGGATACCCACCTATAACAGTCCCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAgg < 2:1723745/76‑1 (MQ=255) aTTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGc > 2:2759668/1‑76 (MQ=255) aTTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGc > 2:4981692/1‑76 (MQ=255) ttCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGcc > 2:3559970/1‑76 (MQ=255) tccccAGCCGAAAAAAATCCCCCCCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGcc < 2:5051097/74‑1 (MQ=255) cccAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCg > 2:6685693/1‑76 (MQ=255) cccAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCg > 1:2371985/1‑76 (MQ=255) cccAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCg > 1:826943/1‑76 (MQ=255) | GCGATCCAACTGCCGATCAATCCCTCACCCGCGCGATACCAGGTCCCGGTGGCACATCCACCCGCCAGAACAATTCCCAGCCCGAAAAGATACCCACCTATAACAGTACCAAGCCACGGGAACGCCCCGGCTTCGTAAGTCAGTAGGCCCG > REL606/2015634‑2015784 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |