| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 990,173 | +CGT | coding (321/780 nt) | ycbC ← | conserved inner membrane protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 990170 | 0 (0.000) | 30 (0.820) +CGT |
28/138 | 0.3 | 100% | coding (324/780 nt) | ycbC | conserved inner membrane protein |
| ? | REL606 | 990171 = | 0 (0.000) | coding (323/780 nt) | ycbC | conserved inner membrane protein | |||||
GCTACGCCTCCCGTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/990102‑990170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACCACCTCCGAGCA > REL606/990171‑990243 ||| GCTACGCCTCCCGTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTG < 1:1077561/76‑1GCTACGCCTCCCGTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTG > 1:276775/1‑76 CTACGCCTCCCGTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGG > 2:332927/1‑76 TACGCCTCCCGTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGC < 2:891636/76‑1 ACGCCTCCCGTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCAGTCAGGCGTCGTGGCA < 2:105303/76‑1 CGTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTA > 2:1088069/1‑76 GTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTAT < 2:777429/76‑1 TGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATT < 1:304715/76‑1 TGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATT > 1:648226/1‑76 GAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTG < 1:542366/76‑1 CAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAA > 1:732679/1‑76 TGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAG < 2:63259/76‑1 TGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAG > 2:271416/1‑76 TCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTC > 1:474397/1‑76 CCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACNGTTACTGCTTAAATTAGAGCTCGG < 1:106027/76‑1 GGATTTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTG < 1:912191/76‑1 TTTCGCGCCATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCA > 1:853765/1‑76 TTTCGCGCCATAAGCGAATACCTTCATTCAGGCGCCGTGGCNGACTGTTATTGATTAAATNAGNGCTCGGTGCCCA > 1:993803/1‑76 CATAAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGT > 2:382886/1‑76 AAGCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGNTCC < 1:1088069/76‑1 GCGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAG < 1:845827/76‑1 CGAATACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGG > 2:285556/1‑76 TACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATA > 2:957699/1‑76 TACCTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATA > 2:250781/1‑76 CTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACC < 1:922273/76‑1 CTTCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACC > 1:353438/1‑76 CTTCACACAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACC > 1:1138035/1‑76 TCATTCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACCAC > 2:60197/1‑76 TCAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACCACCTCC < 1:271416/76‑1 CAGGCGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACCACCTCCG < 2:90873/76‑1 GCGTCGTGGCAGACTGTTATTGATTGAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACCACCTCCGAGC < 2:767195/76‑1 CGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACCACCTCCGAGCA > 1:861037/1‑76 CGTCGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACCACCTCCGAGCA > 2:927200/1‑76 ||| GCTACGCCTCCCGTGAAGATCAGTTTTGATCCCGGATTTTCGCGCCATAAGCGAATACCTTCATTCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/990102‑990170‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGTGGCAGACTGTTATTGATTAAATTAGAGCTCGGTGCCCACTGCGGGTTCCAGGTATAACCACCTCCGAGCA > REL606/990171‑990243 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |