Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 3,015,254 IS150 (+) +3 bp coding (675‑677/1677 nt) ECB_02816 → KpsD protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 2774435 =NA (NA)314 (1.300) 120/148 0.0 100% noncoding (1443/1443 nt) IS150 repeat region
?REL606 3015254 = 0 (0.000)coding (675/1677 nt) ECB_02816 KpsD protein
* ? REL606 = 2775877NA (NA)340 (1.390) 109/150 0.2 100% noncoding (1/1443 nt) IS150 repeat region
?REL606 = 3015256 0 (0.000)coding (677/1677 nt) ECB_02816 KpsD protein

Only 100 of 366 total aligned reads displayed.

GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2774510‑2774435
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCAGCA  >  REL606/3015254‑3015328
                                                                                                                                                       
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             >  1:1172900/1‑76
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             <  2:5925876/76‑1
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             >  2:2835742/1‑76
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             <  2:2340982/76‑1
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             <  1:798818/76‑1
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             <  1:7430713/76‑1
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             <  1:4757986/76‑1
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             <  1:3897182/76‑1
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             <  1:2965638/76‑1
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA                                                                             <  1:2094842/76‑1
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTCTTTGGGGTCAGTACA                                                                             <  1:276028/76‑1
 TCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAC                                                                            <  1:2325614/76‑1
 TCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAC                                                                            <  1:6801787/76‑1
  CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTACTTGTACAACTTTTTGGGGTCAGTACACg                                                                           >  2:6857128/1‑75
  CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACT                                                                           >  2:539503/1‑76
  CTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACT                                                                           >  1:6638432/1‑76
   TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTT                                                                          <  1:5424263/76‑1
   TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTT                                                                          >  1:5957382/1‑76
   TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTT                                                                          <  2:2276428/76‑1
   TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTT                                                                          <  2:4053302/76‑1
   TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTT                                                                          >  2:750401/1‑76
   TGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTT                                                                          <  2:5497441/76‑1
    GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTC                                                                         >  1:6696322/1‑76
    GACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTC                                                                         >  1:6896238/1‑76
     ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCC                                                                        >  2:6714659/1‑76
     ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCC                                                                        >  2:6432660/1‑76
      CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCT                                                                       >  1:5574468/1‑76
      CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCT                                                                       >  2:5704309/1‑76
      CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCT                                                                       >  1:1757714/1‑76
       TCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTG                                                                      <  2:6210970/76‑1
        CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGC                                                                     >  1:2480512/1‑76
          AATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTG                                                                   <  2:5620605/76‑1
           ATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGA                                                                  >  1:977852/1‑76
              GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACG                                                               >  1:6320869/1‑76
              GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACG                                                               <  1:4680693/76‑1
              GAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACG                                                               <  1:3337003/76‑1
                ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGC                                                             >  2:4637959/1‑76
                 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCA                                                            >  2:788829/1‑76
                    CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAAC                                                         >  1:7912509/1‑76
                    CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAAC                                                         >  1:6505572/1‑76
                    CGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAAC                                                         >  1:5639995/1‑76
                     GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACT                                                        <  2:5841479/76‑1
                      GAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTG                                                       >  2:3121787/1‑76
                         TCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGG                                                    <  1:4455616/76‑1
                          CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGC                                                   <  1:3634113/76‑1
                           AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCT                                                  <  2:5200727/76‑1
                           AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCT                                                  >  1:2661644/1‑76
                                TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGC                                             <  2:5090927/76‑1
                                TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGC                                             >  1:5356695/1‑76
                                TATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGC                                             >  1:4315995/1‑76
                                 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCA                                            >  2:3402574/1‑76
                                   ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGT                                          >  2:3038687/1‑76
                                   ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGT                                          >  1:7491820/1‑76
                                   ATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGT                                          >  1:4081703/1‑76
                                    TGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTT                                         >  1:6259317/1‑76
                                     GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTC                                        >  1:2190292/1‑76
                                     GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTC                                        >  1:5081377/1‑76
                                     GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTC                                        <  2:1562844/76‑1
                                     GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTC                                        >  1:6581334/1‑76
                                        TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCC                                     >  2:708676/1‑76
                                        TCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCC                                     >  1:5918524/1‑76
                                         CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGTCTTTCGCAGTTCGCag                                    >  2:7360794/1‑74
                                         CGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCG                                    <  2:2116868/76‑1
                                          GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGA                                   >  1:6972693/1‑76
                                           TGTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGAT                                  <  2:6523245/76‑1
                                            GTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATG                                 >  1:4267507/1‑76
                                            GTTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATG                                 <  2:1073524/76‑1
                                             TTTAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGG                                >  2:4997007/1‑76
                                               TAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTG                              <  1:1057218/76‑1
                                               TAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTG                              <  1:1284658/76‑1
                                               TAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTG                              <  2:1420396/76‑1
                                               TAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTG                              <  1:5208554/76‑1
                                               TAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTG                              <  2:3891795/76‑1
                                               TAACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTG                              <  1:6110698/76‑1
                                                AACTGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGA                             <  1:7315845/76‑1
                                                   TGTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACAC                          >  1:7349202/1‑76
                                                    GTCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACC                         <  1:3836360/76‑1
                                                     TCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCA                        >  2:4405566/1‑76
                                                     TCCAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCA                        <  2:1870627/76‑1
                                                       CAACTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATC                      <  2:1277413/76‑1
                                                          CTTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATC                   >  1:1357531/1‑76
                                                           TTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCG                  >  1:7755219/1‑76
                                                           TTTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCG                  >  2:379830/1‑76
                                                            TTTTGGGGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGT                 >  2:732036/1‑76
                                                                  GGTCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCC           >  1:7303901/1‑76
                                                                    TCAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGC         >  1:4504583/1‑76
                                                                     CAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCG        >  2:2643596/1‑76
                                                                     CAGTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCG        >  1:4893401/1‑76
                                                                       GTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTC      <  1:5295388/76‑1
                                                                       GTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTC      <  2:1684140/76‑1
                                                                       GTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTC      >  1:1984654/1‑76
                                                                       GTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTC      <  2:7605968/76‑1
                                                                       GTACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTC      <  2:3691356/76‑1
                                                                        TACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCA     <  1:1416249/76‑1
                                                                        TACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCA     >  1:2523088/1‑76
                                                                         ACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCAG    <  2:6016735/76‑1
                                                                         ACACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCAG    >  1:1612044/1‑76
                                                                          CACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCAGC   <  2:7219120/76‑1
                                                                           ACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCAGCA  >  2:5331204/1‑76
                                                                           ACTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCAGCA  >  2:819264/1‑76
                                                                                                                                                       
GTCTGACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/2774510‑2774435
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aCTTCCTGCTGAACGGCAAACTGGGGCTTTCGCAGTTCGCCGATGGTGACACCATCATCGTCGGGCCGCGTCAGCA  >  REL606/3015254‑3015328

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.