| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 3,103,274 | IS150 (–) +3 bp | coding (128‑130/483 nt) | ygiV ← | predicted transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2775877 | NA (NA) | 349 (1.420) | 116/150 | 0.1 | 98.5% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | REL606 | 3103274 = | 5 (0.020) | coding (130/483 nt) | ygiV | predicted transcriptional regulator | |||||
| * | ? | REL606 | = 3103276 | 5 (0.020) | 333 (1.360) | 123/150 | 0.0 | 98.5% | coding (128/483 nt) | ygiV | predicted transcriptional regulator |
| ? | REL606 | = 3894996 | NA (NA) | noncoding (1443/1443 nt) | IS150 | repeat region | |||||
Only 100 of 698 total aligned reads displayed.
TCCGGTGCGGTGGTGGCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCA > REL606/3103201‑3103351 | tcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatct < 2:1443175‑M2/3‑1 (MQ=255)tcaaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatct < 2:5666212‑M2/3‑1 (MQ=255) ccGGTGCGGTGGTGGCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTt < 1:2655740‑M1/76‑2 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatctc > 1:4626341‑M2/73‑76 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatctc > 1:7820185‑M2/73‑76 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatctc > 1:3247054‑M2/73‑76 (MQ=255) caaaagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacatctc < 2:3067477‑M2/4‑1 (MQ=255) cggtgcggtgGTGGCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGGCTtg > 2:6471679‑M1/1‑74 (MQ=255) ggtgcggtgGTGGCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgt < 1:4014762‑M1/76‑4 (MQ=255) aagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCttt > 1:1700186‑M2/70‑76 (MQ=255) aagggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCttt < 2:6192087‑M2/7‑1 (MQ=255) tgcggtgGTGGCAGGGGCGTCCCCGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTCTTTa > 2:1204770/1‑76 (MQ=255) agggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTa < 2:6932953‑M2/8‑1 (MQ=255) gggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTAc < 2:7749852‑M2/9‑1 (MQ=255) gcggtgGTGGCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtact < 2:2338250‑M1/76‑7 (MQ=255) ggtattttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACg < 2:8005821‑M2/10‑1 (MQ=255) cggtgGTGGCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactg < 1:4486593‑M1/76‑8 (MQ=255) tggtggCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgacc > 2:6773979‑M1/1‑66 (MQ=255) attttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCca > 1:5360942‑M2/64‑76 (MQ=255) ggtggCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccc > 2:3189923‑M1/1‑65 (MQ=255) ttggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACAt > 1:2268244‑M2/61‑76 (MQ=255) ggctttgacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGa < 2:2920808‑M2/18‑1 (MQ=255) cAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaa < 1:7932619‑M1/76‑17 (MQ=255) aGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaa > 2:1007065‑M1/1‑59 (MQ=255) gggTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaag < 1:2557870‑M1/76‑19 (MQ=255) ggTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagt > 1:2109844‑M1/1‑57 (MQ=255) gacatattaggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAAtt > 1:1079254‑M2/53‑76 (MQ=255) cgtcCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttgg < 1:3106554‑M1/76‑23 (MQ=255) cgtcCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttgg > 1:2886587‑M1/1‑54 (MQ=255) gtcCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttgga > 1:414146‑M1/1‑53 (MQ=255) tcCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggac > 2:5863593‑M1/1‑52 (MQ=255) tcCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggac > 2:5157436‑M1/1‑52 (MQ=255) tcCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggac < 1:646187‑M1/76‑25 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCAc > 1:6796205‑M2/46‑76 (MQ=255) taggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCAc > 2:7050054‑M2/46‑76 (MQ=255) aGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagtt < 1:4767092‑M1/76‑29 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACg > 1:4719379‑M2/45‑76 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACg > 1:1027778‑M2/45‑76 (MQ=255) aggggctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACg > 1:7677221‑M2/45‑76 (MQ=255) cGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaa < 1:2429275‑M1/76‑32 (MQ=255) cGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaa < 2:4777152‑M1/76‑32 (MQ=255) cGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaa < 2:2242658‑M1/76‑32 (MQ=255) gACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaac < 1:4367255‑M1/76‑33 (MQ=255) aCGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaaca < 1:3875439‑M1/76‑34 (MQ=255) ctattccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTa > 1:7150525‑M2/40‑76 (MQ=255) cGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacac > 2:2514755‑M1/1‑42 (MQ=255) cGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacac < 1:6945777‑M1/76‑35 (MQ=255) attccatttcatcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGt > 2:3883862‑M2/38‑76 (MQ=255) aaaaGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgagg < 1:1276211‑M1/76‑39 (MQ=255) aaGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggca < 2:2742755‑M1/76‑41 (MQ=255) cTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatata > 2:7257449‑M1/1‑32 (MQ=255) tGGCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:3724191‑M1/1‑31 (MQ=255) catcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAAtt > 2:5981039‑M2/29‑76 (MQ=255) ggCTTTGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatatagg > 1:7341378‑M1/1‑30 (MQ=255) atcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTc > 2:1851764‑M2/28‑76 (MQ=255) atcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTc > 2:3299422‑M2/28‑76 (MQ=255) atcgtccaacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTc > 2:4331922‑M2/28‑76 (MQ=255) ttGGTTAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctg < 2:3511604‑M1/76‑51 (MQ=255) caacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCt < 1:8090187‑M2/55‑1 (MQ=255) caacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCt < 2:8091501‑M2/55‑1 (MQ=255) caacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCt < 2:1557302‑M2/55‑1 (MQ=255) caacaaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCt < 1:1502121‑M2/55‑1 (MQ=255) ttAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattc > 1:7512620‑M1/1‑22 (MQ=255) tAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc > 1:3603116‑M1/1‑21 (MQ=255) tAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc > 2:1990725‑M1/1‑21 (MQ=255) tAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc > 1:6344054‑M1/1‑21 (MQ=255) tAACAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcc > 2:7571682‑M1/1‑21 (MQ=255) caaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACa > 1:7585564‑M2/19‑76 (MQ=255) aaaatgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAg > 1:4860868‑M2/18‑76 (MQ=255) aaCAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccg > 1:658371‑M1/1‑20 (MQ=255) aCAGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattcaga < 1:1850434‑M1/76‑58 (MQ=255) aCAGGAGAAAGCCCCGTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGc < 1:1204770/76‑1 (MQ=255) aGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgata > 2:7644684‑M1/1‑17 (MQ=255) aGGAGAAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgata < 1:5223628‑M1/76‑60 (MQ=255) tgggtgcagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGt > 2:5480095‑M2/14‑76 (MQ=255) gagaAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatatt < 1:915500‑M1/76‑62 (MQ=255) agaAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattc > 2:5284051‑M1/1‑14 (MQ=255) gaAAGCCCCGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattca > 2:6317323‑M1/1‑13 (MQ=255) cagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCa < 2:4248500‑M2/69‑1 (MQ=255) cagtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCa > 2:4697289‑M2/8‑76 (MQ=255) agtacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCaa > 2:1369366‑M2/7‑76 (MQ=255) ccccGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattgg < 2:40660‑M1/76‑69 (MQ=255) ccccGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattgg < 2:3393039‑M1/76‑69 (MQ=255) tacaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACa > 1:6158069‑M2/5‑76 (MQ=255) cccGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattgga > 1:1959618‑M1/1‑7 (MQ=255) ccGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggag > 2:2055047‑M1/1‑6 (MQ=255) ccGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggag > 1:1398841‑M1/1‑6 (MQ=255) acaTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACAt > 1:5306447‑M2/4‑76 (MQ=255) cGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag < 2:497239‑M1/50‑46 (MQ=255) cGTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatatag > 1:497239‑M1/1‑5 (MQ=255) gTCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtatgattccgatattcaattggagtc < 1:3410952‑M1/76‑73 (MQ=255) aTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCg < 1:5806022‑M2/75‑1 (MQ=255) tCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtca > 1:5617980‑M1/1‑3 (MQ=255) tCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtca > 1:5921237‑M1/1‑3 (MQ=255) tCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtca > 1:3006656‑M1/1‑3 (MQ=255) tCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtca > 2:4545614‑M1/1‑3 (MQ=255) tCTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtca > 1:5435753‑M1/1‑3 (MQ=255) cTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcag > 2:3663621‑M1/1‑2 (MQ=255) cTtgtactgaccccaaaaagttggacagttaaacacgaggcatataggtctgattccgatattcaattggagtcag > 2:85336‑M1/1‑2 (MQ=255) tctTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCca > 2:6604159/1‑76 (MQ=255) | TCCGGTGCGGTGGTGGCAGGGTCGTCCCAGGCGACGCCAAAAGTCTGGCTTTGGTTAACAGGAGAAAGCCCCGTCTCTTTACGCCACATGATAAATTTCGCCACGCTGTAGTTGAGCAATTCAGGGCTACAGCGGTGCGGCAACATCGCCA > REL606/3103201‑3103351 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |