Predicted mutation
evidence seq id position mutation annotation gene description
JC REL606 3,843,787 Δ54 bp coding (251‑304/1404 nt) dnaA ← chromosomal replication initiation protein

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 = 38437864 (0.020)174 (0.900) 84/132 0.5 98.2% coding (305/1404 nt) dnaA chromosomal replication initiation protein
?REL606 3843841 = 3 (0.020)coding (250/1404 nt) dnaA chromosomal replication initiation protein

Only 100 of 227 total aligned reads displayed.

AACGATAGGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3843703‑3843786
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtttgcgTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGA  >  REL606/3843841‑3843915
                                                                                                                                                                
AACGATAGGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTG                                                                                      <  1:1031353/76‑1
   GATAGGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGT                                                                                   >  1:2885803/1‑76
   GATAGGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGT                                                                                   >  2:1419489/1‑76
     TAGGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGGGTTT                                                                                 >  1:1504920/1‑76
     TAGGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGGTT                                                                                 >  1:575118/1‑76
      AGGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTG                                                                                >  1:2692293/1‑76
       GGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGC                                                                               <  1:354603/76‑1
        GTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCG                                                                              <  1:3320948/76‑1
          CGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTC                                                                            >  2:5550362/1‑76
             TTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCCTCACC                                                                        >  2:838773/1‑76
              TCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCG                                                                       >  1:4669373/1‑76
              TCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCG                                                                       <  2:6647132/76‑1
                TGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGGCACCGGT                                                                     >  1:952923/1‑76
                 GCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTT                                                                    >  2:3906815/1‑76
                 GCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTT                                                                    >  2:2394481/1‑76
                 GCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTT                                                                    <  1:1747665/76‑1
                 GCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTT                                                                    <  1:3851021/76‑1
                 GCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCCGTT                                                                    >  2:4564072/1‑76
                    GGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGGGTTTGCGTAAACGGTTTtg                                                                 >  2:5743527/1‑74
                    GGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGGGTCACCGGGTTtg                                                                 >  2:5384618/1‑74
                    GGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGG                                                                 <  1:1833800/76‑1
                    GGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGG                                                                 <  1:5998493/76‑1
                      GGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCCGTTGCGTCACCCGGTTTGtg                                                                >  2:4420666/1‑74
                         CGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCG                                                            <  1:704786/76‑1
                         CGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGGGCCG                                                            >  1:2767364/1‑76
                         CGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGGTTGCGTCACCGGGTTTGTGCCG                                                            >  1:145378/1‑76
                           GGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGGCACCCGTTTGGTGGCGgc                                                          >  1:6843659/1‑74
                            GACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTT                                                                   >  1:2374069/1‑66
                             ACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTT                                                        <  1:1311919/76‑1
                             ACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTT                                                        >  1:2589693/1‑76
                             ACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTT                                                        <  1:5510726/76‑1
                             ACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTT                                                        <  1:172874/76‑1
                             ACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGGTTTGTGGCGGCTT                                                        >  2:6076821/1‑76
                              CGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTC                                                       <  1:193092/76‑1
                              CGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGGGCCGACTTC                                                       >  1:4772671/1‑76
                              CGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGGGCCGACTTC                                                       >  2:2947165/1‑76
                              CGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGGTTGGTGCCGGCTTC                                                       >  2:6506993/1‑76
                                TTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAA                                                     <  2:3759401/76‑1
                                TTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGGTTGGTGGCGACTTCAA                                                     >  1:43133/1‑76
                                 TATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAA                                                    <  1:3271680/76‑1
                                 TATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGGTTGCGTCACCGGTTTGGGGCCGGCTTTAAA                                                    >  1:2908954/1‑76
                                  ATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCTGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAA                                                   >  1:3968609/1‑76
                                  ATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGGCTTCAAAA                                                   >  2:4055938/1‑76
                                   TCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGGCGACTTCAAAAC                                                  >  2:4713508/1‑76
                                    CCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGCCTTCAAAACG                                                 >  2:6190060/1‑76
                                    CCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACG                                                 <  2:774694/76‑1
                                    CCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACG                                                 <  1:2204325/76‑1
                                     CCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGGGTTACCGGGTTGGTGCCGACTTCAAAACGa                                                >  2:3021519/1‑75
                                     CCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGC                                                <  2:3468904/76‑1
                                      CAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGAATTTAAAACGCA                                               >  2:6358842/1‑76
                                           TGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGT                                          <  1:2548441/76‑1
                                           TGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAAAGCAGCTGg                                          >  2:581911/1‑75
                                            GAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGGCTTCAAAACGCAGCTGTG                                         >  1:2341569/1‑76
                                            GAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTG                                         >  1:3667441/1‑76
                                              GCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGG                                       <  2:3063816/76‑1
                                              GCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGG                                       <  1:854947/76‑1
                                              GCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGG                                       <  2:1482800/76‑1
                                               CGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGGTTGGTGCCGACTTCAAAAAGCAGCTGTGGGG                                      >  2:235430/1‑76
                                                  GTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGGGTCACCGGTTTGGTGCCGACTTGAAAACGCAGCTGTGGGGCAT                                   >  1:3497299/1‑76
                                                  GTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCAACGGGTTTGTGGCGACTTCAAAACGCAGCTGTGGGGCAa                                   >  2:411435/1‑75
                                                   TAGAAGGCGCAGCACGTTGCGGCTGCGTTTTCGTCACCGGGTTTGTGCCGACTTCAAAACGCAGCTGTGGGGGATC                                  >  2:2085968/1‑76
                                                   TAGAAGGCGCAGCACGTTGCGGCTGCGGTTGCGTGTCCCGGTTTGTGCCGACTTCAAAACGCAGCTGTGGGGAATC                                  >  1:6919612/1‑76
                                                    AGAAGGCGCAGCACGTTGCTGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCC                                 <  1:6971172/76‑1
                                                    AGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGGATCC                                 >  1:4989425/1‑76
                                                    AGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCC                                 >  2:3202206/1‑76
                                                    AGAAGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCC                                 <  1:3084711/76‑1
                                                     GAAGGCGCAGCACGTTGCGGCTGCGGTTGCGTCACCGGTTTGGGGCCGACTTCAAAAAGCAGCTGTGGGGCATCCG                                >  2:4298119/1‑76
                                                       AGGCGCAGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCCCT                              >  2:2590533/1‑76
                                                             AGCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAG                        <  1:4857104/76‑1
                                                              GCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGA                       <  2:1756004/76‑1
                                                              GCACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGA                       >  1:6760819/1‑76
                                                               CACGTGGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAA                      <  2:6395423/76‑1
                                                                ACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCCGCTGTGGGGCATCCGCTCCGCAGAAA                     >  2:1895585/1‑76
                                                                ACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAA                     <  1:6771306/76‑1
                                                                ACGTTGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAA                     >  1:5943236/1‑76
                                                                ACGTGGCGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACACAGCTGTGGGGCATCCGCTCCGCAGAAA                     <  1:4567049/76‑1
                                                                 CGTTGCGGCTGGGTTTGCGTCACCGGTTTGGGGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAAC                    >  2:1533772/1‑76
                                                                      CGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTT               <  2:5887549/76‑1
                                                                      CGGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTT               <  2:3585437/76‑1
                                                                       GGCTGCGTTTGCGTCCCCGGTTTGGTGCCGACTTCAAACCGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTA              <  2:5454722/76‑1
                                                                       GGCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTA              <  1:5333721/76‑1
                                                                       GGCTGCGTTTGCGGCACCGGTTTGGTGCCGAGTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGGTA              >  2:5128448/1‑76
                                                                        ggTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAG             <  1:3131798/74‑1
                                                                        GCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAG             <  2:2934855/76‑1
                                                                        GCTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAG             <  2:2262704/76‑1
                                                                         CTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGC            >  2:1679417/1‑76
                                                                         CTGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGC            <  1:1334089/76‑1
                                                                          tcgGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGTTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCA           <  2:46375/73‑1
                                                                          TGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCA           >  1:2039690/1‑76
                                                                          TGCGTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCA           <  2:3930915/76‑1
                                                                             GTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTC        >  1:5648088/1‑76
                                                                             GTTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTC        <  1:212290/76‑1
                                                                              TTTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCC       >  1:4170447/1‑76
                                                                               TTGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCA      <  2:6041059/76‑1
                                                                                TGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCAT     <  1:518565/76‑1
                                                                                TGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCAT     >  2:6750689/1‑76
                                                                                TGCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCAT     <  1:1176038/76‑1
                                                                                 GCGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATT    >  2:7063509/1‑76
                                                                                  CGTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTG   >  1:5369684/1‑76
                                                                                   GTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGA  <  2:4887668/76‑1
                                                                                                                                                                
AACGATAGGTCGGTTCTGCCGGGGCCGGGACGTTATCCCAACCTGAGCGCGTAGAAGGCGCAGCACGTTGCGGCTGCGTTTGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/3843703‑3843786
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtttgcgTCACCGGTTTGGTGCCGACTTCAAAACGCAGCTGTGGGGCATCCGCTCCGCAGAAACTGGTTAGCAGTCCATTGA  >  REL606/3843841‑3843915

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.