| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1530048 | 271 (1.230) | 3 (0.010) | 3/144 | 21.2 | 1.0% | coding (171/216 nt) | bdm | biofilm‑dependent modulation protein |
| ? | REL606 | 3790384 = | 311 (1.480) | coding (2144/3498 nt) | ECB_03531 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 318 total aligned reads displayed.
CAAACTCTCCGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAACAGGTGG > REL606/3790310‑3790459 | aaaCTCTCCGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCgg > 2:4324473/1‑76 (MQ=255) tctcCGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTaa < 1:5096632/76‑1 (MQ=255) tctcCGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTaa > 2:1621628/1‑76 (MQ=255) tctcCGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTaa > 2:4426607/1‑76 (MQ=255) tctcCGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTaa < 2:6098643/76‑1 (MQ=255) ctcCGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAat > 1:1732928/1‑76 (MQ=255) ccGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAatat > 1:3111887/1‑76 (MQ=255) ccGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAatat < 2:6778417/76‑1 (MQ=255) cGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAAtata > 1:4538735/1‑76 (MQ=255) cGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAAtata < 1:1234270/76‑1 (MQ=255) cGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAAtata > 2:1864461/1‑76 (MQ=255) gggTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATac < 1:3395122/76‑1 (MQ=255) ggTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATact < 2:3693517/76‑1 (MQ=255) ggTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATact < 2:3149396/76‑1 (MQ=255) gTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactg < 1:1636244/76‑1 (MQ=255) gTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactg > 1:6768851/1‑76 (MQ=255) gTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactg < 2:4743246/76‑1 (MQ=255) tttGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactga > 2:5517268/1‑76 (MQ=255) ttGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactgac > 1:789684/1‑76 (MQ=255) ttGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactgac > 1:5369231/1‑76 (MQ=255) tGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactgact > 1:4090315/1‑76 (MQ=255) tGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactgact < 2:5812422/76‑1 (MQ=255) tGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATactgact < 1:63463/76‑1 (MQ=255) ggggCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGt < 1:4976431/76‑1 (MQ=255) gggCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTc < 1:1316194/76‑1 (MQ=255) ggCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCg > 1:4719518/1‑76 (MQ=255) cGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGa < 2:6439484/76‑1 (MQ=255) gTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAg < 1:6796096/76‑1 (MQ=255) tGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAggg > 2:116155/1‑76 (MQ=255) tGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAggg > 2:2683876/1‑76 (MQ=255) tGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAggg > 2:1652163/1‑76 (MQ=255) tGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAggg < 2:851937/76‑1 (MQ=255) tGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACGACATATATGCCGGGTAATATACTGACTGTCGGAggg < 2:5133450/76‑1 (MQ=255) gCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGa > 2:2857421/1‑76 (MQ=255) gCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGa > 1:141503/1‑76 (MQ=255) cAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGaa > 1:2529637/1‑76 (MQ=255) aGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAAt > 1:2138358/1‑76 (MQ=255) gAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTa < 1:6634122/76‑1 (MQ=255) aaaTCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTac < 1:6198675/76‑1 (MQ=255) tCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACt < 2:1553177/76‑1 (MQ=255) cTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTg < 2:4201325/76‑1 (MQ=255) cTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTg < 1:3708623/76‑1 (MQ=255) cTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTg > 1:4435713/1‑76 (MQ=255) gAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGc < 2:6499707/76‑1 (MQ=255) gAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGc > 2:616369/1‑76 (MQ=255) aGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCa < 2:1435691/76‑1 (MQ=255) cAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGa > 2:6301254/1‑76 (MQ=255) cAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGa > 2:5603154/1‑76 (MQ=255) aaTAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGaa < 2:6322195/76‑1 (MQ=255) aaTAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGaa < 2:3466292/76‑1 (MQ=255) aaTAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGaa > 2:2331466/1‑76 (MQ=255) aaTAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGaa < 1:3508932/76‑1 (MQ=255) aTAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGaaa > 1:2192313/1‑76 (MQ=255) aTAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGaaa > 1:3924491/1‑76 (MQ=255) tAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAAt < 2:6885008/76‑1 (MQ=255) tAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAAt > 1:2291563/1‑76 (MQ=255) tAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAAt < 2:2924497/76‑1 (MQ=255) aGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATg > 2:3790911/1‑76 (MQ=255) aGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATg < 2:720197/76‑1 (MQ=255) tGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGa < 2:1757369/76‑1 (MQ=255) tGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGa > 1:6610426/1‑76 (MQ=255) tGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGa < 1:3178165/76‑1 (MQ=255) ggTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGAc < 2:6961419/76‑1 (MQ=255) ggTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGAc < 1:3566654/76‑1 (MQ=255) gTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGGATTACACTGGCAGAAATGGACt > 1:4204610/1‑76 (MQ=255) gTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACt > 2:1318832/1‑76 (MQ=255) gTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACt < 2:5318033/76‑1 (MQ=255) gTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACt < 1:707969/76‑1 (MQ=255) tataGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACtt > 2:2063991/1‑76 (MQ=255) tataGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACtt < 2:246642/76‑1 (MQ=255) ataGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTa > 1:4333016/1‑76 (MQ=255) aGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTAtt < 1:1142246/76‑1 (MQ=255) tCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATtct < 2:2417985/76‑1 (MQ=255) cGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATtctc > 1:4866220/1‑76 (MQ=255) cGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATtctc > 1:5996789/1‑76 (MQ=255) cGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATtctc > 1:5872322/1‑76 (MQ=255) aTCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTctcct > 1:2647583/1‑76 (MQ=255) aTCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTctcct > 1:1807688/1‑76 (MQ=255) tctcACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTctcctc < 2:2769892/76‑1 (MQ=255) tctcACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTctcctc > 2:5404028/1‑76 (MQ=255) tctcACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTctcctc > 2:508554/1‑76 (MQ=255) tctcACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAAAGGACTTATTctcctc > 2:3428007/1‑76 (MQ=255) cACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCcag > 1:5573767/1‑76 (MQ=255) cACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCcag > 1:6978631/1‑76 (MQ=255) aCTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCcaga < 1:3000949/76‑1 (MQ=255) aCTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCcaga > 2:4622880/1‑76 (MQ=255) cTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTTCTCcagac > 2:4898266/1‑76 (MQ=255) cATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACGCTGGCTGATAAGGACTTGATCTCCTCcagacaga > 2:5673454/1‑76 (MQ=255) cATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCcagacaga > 1:1984998/1‑76 (MQ=255) cATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCcagacaga > 1:693670/1‑76 (MQ=255) tatatGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGaaa > 1:1018068/1‑76 (MQ=255) tatatGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGaaa < 1:6252317/76‑1 (MQ=255) atatGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAAc > 1:5191002/1‑76 (MQ=255) atatGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAAc < 1:2130920/76‑1 (MQ=255) atGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAACAg > 2:5930825/1‑76 (MQ=255) atGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAACAg > 2:5709522/1‑76 (MQ=255) tGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAACAgg < 1:987377/76‑1 (MQ=255) gCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAACAggt > 2:3048724/1‑76 (MQ=255) cGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAACAggtgg > 2:1084142/1‑76 (MQ=255) cGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAACAggtgg > 2:4097802/1‑76 (MQ=255) | CAAACTCTCCGGGTTTGGGGGCGTTGCAGGAAATCTGAGCAATAGTGGTATAGTCGATCTCACTACATATATGCCGGGTAATATACTGACTGTCGGAGGGAATTACACTGGCAGAAATGGACTTATTCTCCTCCAGACAGAAACAGGTGG > REL606/3790310‑3790459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |