New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	1181703 =	179 (0.810)	4 (0.020)	4/150	18.5	1.9%	coding (1042/1305 nt)	ndh	respiratory NADH dehydrogenase 2/cupric reductase
	?	REL606	1663278 =	232 (1.050)					coding (506/1404 nt)	fumC	fumarate hydratase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CAGCGGCTTACCGTTTATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/1181723‑1181703 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGG  >  REL606/1663278‑1663351                                                                                                 CAGCGGCTTACCGTTTATCTGTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAG                                   <  1:4566011/62‑1 CAGCGGCTTACCGTTTATCTGTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAG                                   >  2:4566011/1‑62                   gTGTGTGTCAGGGTTTTAAGCTGAGGAATGAGTGGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCG   <  2:6057173/75‑1                    TGTGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGG  <  2:4263931/76‑1                                                                                                 CAGCGGCTTACCGTTTATCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/1181723‑1181703 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTGTCAGGGTTTTAAGCTGAGGAATGAGTTGCTTGCGCAGCGCCAGCAGCGCCGCAACGTGCATCGCCGTCGG  >  REL606/1663278‑1663351

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.