| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 79645 = | 232 (1.050) | 4 (0.020) | 4/146 | 18.2 | 1.7% | coding (459/1656 nt) | yabN | DNA‑binding transcriptional regulator |
| ? | REL606 | 79647 = | 227 (1.050) | coding (457/1656 nt) | yabN | DNA‑binding transcriptional regulator | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 232 total aligned reads displayed.
AAGCGGTGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGG > REL606/79570‑79719 | cGGTGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGaa > 1:5770744/1‑76 (MQ=255) cGGTGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGaa > 1:2876224/1‑76 (MQ=255) cGGTGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGaa > 1:2153177/1‑76 (MQ=255) ggTGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAAc < 1:2492769/76‑1 (MQ=255) tGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTg > 1:1163073/1‑76 (MQ=255) tGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTg > 2:6780640/1‑76 (MQ=255) tGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTg < 1:779259/76‑1 (MQ=255) tGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTg < 1:360735/76‑1 (MQ=255) gATATTTGCTGCCAGTGGTGGGCGATGTCTGTTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGa > 2:5235267/1‑76 (MQ=255) gATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAGCTTCGCCATTTT‑CTCATTTCTGCGCATTAGCGGACTGa > 2:3633246/1‑76 (MQ=255) atatTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGaa > 2:1816882/1‑76 (MQ=255) atatTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGaa < 2:5138366/76‑1 (MQ=255) tatTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAg < 2:185620/76‑1 (MQ=255) atTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGa > 1:3925010/1‑76 (MQ=255) ttGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGAtt > 2:1860543/1‑76 (MQ=255) tgctgcCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGAttt < 2:2931702/76‑1 (MQ=255) tgctgcCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGAttt > 1:3829504/1‑76 (MQ=255) tgcCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGcc > 1:3254791/1‑76 (MQ=255) tgcCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGcc < 1:1414032/76‑1 (MQ=255) gcCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCg > 1:6132616/1‑76 (MQ=255) gcCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCg < 1:5939415/76‑1 (MQ=255) gcCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCg < 2:4696484/76‑1 (MQ=255) gcCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCg > 2:4801561/1‑76 (MQ=255) gcCAGTGGTGGGCGATGTCTGCCTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCg < 2:3786565/76‑1 (MQ=255) ccAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCgg > 2:1464446/1‑76 (MQ=255) ccAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGAGCGTTAGCGAACTGAAGATTTGCCgg > 1:1188132/1‑76 (MQ=255) aGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGc < 1:1049531/76‑1 (MQ=255) gtggtgGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCa > 2:4927816/1‑76 (MQ=255) gtggGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAata > 2:4481564/1‑76 (MQ=255) gtggGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAata > 2:3049850/1‑76 (MQ=255) gtggGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAata > 2:1356007/1‑76 (MQ=255) gggCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATg > 1:3759637/1‑76 (MQ=255) gggCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATg > 1:7049481/1‑76 (MQ=255) gCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATggg > 2:1216439/1‑76 (MQ=255) gATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGtt > 1:5083356/1‑76 (MQ=255) gATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGtt > 1:7066631/1‑76 (MQ=255) tGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTc < 2:6079573/76‑1 (MQ=255) tGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTc > 2:1064020/1‑76 (MQ=255) tGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTc < 2:2487013/76‑1 (MQ=255) gTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCg < 1:6818296/76‑1 (MQ=255) tCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCgg < 2:905547/76‑1 (MQ=255) tCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCgg < 2:6193374/76‑1 (MQ=255) tCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCgg < 2:3957397/76‑1 (MQ=255) cTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGa > 1:1197980/1‑76 (MQ=255) cTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGa < 2:6744872/76‑1 (MQ=255) cTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGa > 1:4587472/1‑76 (MQ=255) gCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAAc < 1:5147061/76‑1 (MQ=255) ttCCGG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACgg > 2:731932/1‑76 (MQ=255) ttCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACgg < 1:4145747/76‑1 (MQ=255) ttCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACgg > 2:552822/1‑76 (MQ=255) tCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGgc > 2:5430680/1‑76 (MQ=255) ccAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGgcg < 2:4107719/76‑1 (MQ=255) cAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGgcgc < 2:6386671/76‑1 (MQ=255) aG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCa < 1:4479097/76‑1 (MQ=255) aG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCa < 2:2876224/76‑1 (MQ=255) g‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCaa > 1:6744274/1‑76 (MQ=255) ttCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAAt > 1:3436220/1‑76 (MQ=255) tCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATg > 2:5064563/1‑76 (MQ=255) ccccATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATgc > 1:4377296/1‑76 (MQ=255) ccccATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATgc > 1:2796803/1‑76 (MQ=255) ccccATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATgc > 1:6038052/1‑76 (MQ=255) cccATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATgag < 1:4718817/76‑3 (MQ=255) ccATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATgcgc < 2:5992804/76‑1 (MQ=255) ccATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATgcgc > 1:1755083/1‑76 (MQ=255) aTTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTg > 1:4007043/1‑76 (MQ=255) ttttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGc > 1:253810/1‑76 (MQ=255) tttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGcc > 2:219225/1‑76 (MQ=255) ttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCa < 1:2250255/76‑1 (MQ=255) ttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCa < 2:6883650/76‑1 (MQ=255) ttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCa > 1:1611807/1‑76 (MQ=255) ttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCa < 2:810936/76‑1 (MQ=255) ttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCa > 1:2116244/1‑76 (MQ=255) ttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCa < 2:4129025/76‑1 (MQ=255) ttCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCa > 2:4647352/1‑76 (MQ=255) tCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAg > 1:5285136/1‑76 (MQ=255) tCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAg > 1:3078229/1‑76 (MQ=255) tcTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAgg < 2:4746809/75‑1 (MQ=255) ccTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAgg > 1:6694408/1‑76 (MQ=255) cTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGt < 2:645808/76‑1 (MQ=255) tCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTa > 1:4649810/1‑76 (MQ=255) cATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAg > 1:939660/1‑76 (MQ=255) cATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAg > 1:4891498/1‑76 (MQ=255) aTTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGc < 2:4838873/76‑1 (MQ=255) tttATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCa < 2:579096/76‑1 (MQ=255) ttATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAg > 1:6852773/1‑76 (MQ=255) ttATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAg > 1:558245/1‑76 (MQ=255) ttATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAg > 2:6269423/1‑76 (MQ=255) ttATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAg < 2:269135/76‑1 (MQ=255) tATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGGAGCAGa > 1:2695574/1‑76 (MQ=255) aTGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGAt > 2:1996329/1‑76 (MQ=255) aTGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGAt > 1:4782470/1‑76 (MQ=255) aTGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGAt > 2:3837938/1‑76 (MQ=255) gcgcGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTa < 2:3223649/76‑1 (MQ=255) gcgcGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTa < 2:3505933/76‑1 (MQ=255) gcgcGTTAGCGAACTGAAGATTTGCCGGACAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTa < 2:1428639/76‑1 (MQ=255) cgcgTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTAc > 1:4461037/1‑76 (MQ=255) cgcgTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTAc < 1:2609534/76‑1 (MQ=255) gcgTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTACg > 1:4900940/1‑76 (MQ=255) cgTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTACGc > 1:5718041/1‑76 (MQ=255) tAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAAc < 1:3203818/76‑1 (MQ=255) | AAGCGGTGATATTTGCTGCCAGTGGTGGGCGATGTCTGCTTCCAG‑TTCCCCATTTTCCTCATTTATGCGCGTTAGCGAACTGAAGATTTGCCGGGCAATATGGGTTTCGGAACGGCGCAATGCGCTGCCAGGTAGCAGATTACGCAACGG > REL606/79570‑79719 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |