| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3025591 | 317 (1.000) | 12 (0.040) | 7/144 | 19.5 | 4.1% | coding (1212/1377 nt) | ECB_02826 | hypothetical protein |
| ? | REL606 | = 3025818 | 255 (0.840) | coding (985/1377 nt) | ECB_02826 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 267 total aligned reads displayed.
CTGAAATATCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGCCTGT > REL606/3025743‑3025893 | tGAAATATCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGc < 1:3041468/76‑1 (MQ=255) aaaTATCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCAt < 2:1759224/76‑1 (MQ=255) aaaTATCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCAt < 2:8909019/76‑1 (MQ=255) aaTATCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATg > 2:2961857/1‑76 (MQ=255) aaTATCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATg < 1:121398/76‑1 (MQ=255) aaTATCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATg < 1:5454676/76‑1 (MQ=255) atatCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGc < 1:4804938/76‑1 (MQ=255) atCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCaa > 1:529369/1‑76 (MQ=255) atCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCaa < 1:9259549/76‑1 (MQ=255) tCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGCAAGCATGCAAg > 2:10190275/1‑76 (MQ=255) tCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAg < 1:5920829/76‑1 (MQ=255) cacaAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGa > 2:112866/1‑76 (MQ=255) cacaAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGa > 1:148202/1‑76 (MQ=255) aaaTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACg > 1:800123/1‑76 (MQ=255) aaaTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACg < 1:6203162/76‑1 (MQ=255) aaaTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACg > 2:6441012/1‑76 (MQ=255) aaaTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACg < 2:5820686/76‑1 (MQ=255) aaaTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACg < 1:4188765/76‑1 (MQ=255) aaTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGa < 2:5153356/76‑1 (MQ=255) aaTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGa < 1:7938173/76‑1 (MQ=255) aaTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGa < 1:2076717/76‑1 (MQ=255) aTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGAt > 2:4086911/1‑76 (MQ=255) aTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGAt < 1:5814796/76‑1 (MQ=255) aTAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGAt < 2:9363075/76‑1 (MQ=255) aaaCAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCt > 2:9209445/1‑76 (MQ=255) cAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATg > 2:3318222/1‑76 (MQ=255) cAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATg > 2:7988814/1‑76 (MQ=255) cAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATg > 1:1777817/1‑76 (MQ=255) aaaTCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGa > 2:7519499/1‑76 (MQ=255) aaaTCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGa > 1:3320407/1‑76 (MQ=255) aaaTCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGa < 2:7544381/76‑1 (MQ=255) aaTCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGaa < 1:1904554/76‑1 (MQ=255) cACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACt < 1:9951594/76‑1 (MQ=255) cACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACt < 2:9991151/76‑1 (MQ=255) cACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACt < 1:1608844/76‑1 (MQ=255) aCTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTa > 2:6605462/1‑76 (MQ=255) aCTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTa > 2:1626444/1‑76 (MQ=255) cTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTAt < 1:4014132/76‑1 (MQ=255) tGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTAtt > 2:6100411/1‑76 (MQ=255) tGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTAtt > 1:7309497/1‑76 (MQ=255) gTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTAttt < 1:8927239/76‑1 (MQ=255) ttAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTAtttt > 2:6565634/1‑76 (MQ=255) ttAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTAtttt > 1:9434148/1‑76 (MQ=255) ttAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTAtttt > 1:2427705/1‑76 (MQ=255) tAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTg > 2:2446165/1‑76 (MQ=255) aacCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAAt < 1:1049093/76‑1 (MQ=255) aacCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAAt < 1:5413161/76‑1 (MQ=255) aacCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAAt > 2:9677035/1‑76 (MQ=255) acCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATg < 1:629711/76‑1 (MQ=255) cAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCa > 2:4323874/1‑76 (MQ=255) cAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCa > 2:6498676/1‑76 (MQ=255) aGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATc > 1:5006705/1‑76 (MQ=255) gTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCt < 1:4474649/76‑1 (MQ=255) gTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCt < 2:3112104/76‑1 (MQ=255) ttGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCtt < 2:8406887/76‑1 (MQ=255) ttGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCtt > 1:3202845/1‑76 (MQ=255) tGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTg < 1:7610305/76‑1 (MQ=255) tGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTg > 1:3601212/1‑76 (MQ=255) tGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTg > 1:10010593/1‑76 (MQ=255) tGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTg < 1:8314922/76‑1 (MQ=255) gggTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTgg > 2:1806060/1‑76 (MQ=255) ggTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGa < 2:2767507/76‑1 (MQ=255) ggTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGa < 2:560635/76‑1 (MQ=255) tATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATc < 1:6351203/76‑1 (MQ=255) ggTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGttt < 2:7256775/76‑1 (MQ=255) gTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTc > 1:7711201/1‑76 (MQ=255) gTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTc > 2:6386110/1‑76 (MQ=255) ttCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCt > 1:2886030/1‑76 (MQ=255) ttCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCt < 2:1354014/76‑1 (MQ=255) ttCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCt < 1:6938826/76‑1 (MQ=255) tCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTa < 1:3733329/76‑1 (MQ=255) tCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTa > 2:3885461/1‑76 (MQ=255) tCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTa > 1:6516136/1‑76 (MQ=255) tCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTa > 2:3688664/1‑76 (MQ=255) cTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTaa > 1:7069760/1‑76 (MQ=255) cTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTaa < 1:2738398/76‑1 (MQ=255) tGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAAt < 1:4950600/76‑1 (MQ=255) gACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATg < 2:3281539/76‑1 (MQ=255) cTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGtt > 1:9171446/1‑76 (MQ=255) tGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGtttt < 1:4731837/76‑1 (MQ=255) tGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGtttt > 1:9035641/1‑76 (MQ=255) gTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTa < 2:442311/76‑1 (MQ=255) gTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTa > 2:5904539/1‑76 (MQ=255) gTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTa > 2:8637253/1‑76 (MQ=255) ttAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTAt > 2:9500736/1‑76 (MQ=255) aGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTAtct > 2:7089996/1‑76 (MQ=255) cAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCg > 1:5891450/1‑76 (MQ=255) agaTTTAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCg > 2:5259756/3‑76 (MQ=255) aaTTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGt > 1:462505/1‑76 (MQ=255) aTTGAAAGCATGCAAGAACGATCTATGAAGCTATTTTGTAATGCATCTTGGATCGTTTCTAATGTGTTATCTCGTg > 2:1872562/1‑76 (MQ=255) aTTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTg > 1:4744920/1‑76 (MQ=255) ttGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGa > 2:8783225/1‑76 (MQ=255) tGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAg > 2:6814088/1‑76 (MQ=255) gAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGc > 2:7728800/1‑76 (MQ=255) gAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGc > 2:7501955/1‑76 (MQ=255) gAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGc > 1:8434426/1‑76 (MQ=255) aaaGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGcc > 2:2367203/1‑76 (MQ=255) aaaGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGcc > 2:3454470/1‑76 (MQ=255) aGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGCCTg < 2:4820432/76‑1 (MQ=255) gCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGCCTGt < 1:3828192/76‑1 (MQ=255) | CTGAAATATCACAAATAAACAAATCACTGTTAACAACCAAGTTGGGTATCGGTTCTGACTTGTTAGCAATTGAAAGCATGCAAGAACGATCTATGAAACTATTTTGTAATGCATCTTGGATCGTTTCTAATGTTTTATCTCGTGAGCCTGT > REL606/3025743‑3025893 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |