| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 2,511,675 | Δ8 bp | intergenic (+139/‑393) | acrD → / → yffB | aminoglycoside/multidrug efflux system/hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2511674 | 1 (0.020) | 47 (1.140) | 41/136 | 0.1 | 98.0% | intergenic (+138/‑401) | acrD/yffB | aminoglycoside/multidrug efflux system/hypothetical protein |
| ? | REL606 | 2511683 = | 1 (0.020) | intergenic (+147/‑392) | acrD/yffB | aminoglycoside/multidrug efflux system/hypothetical protein | |||||
CCTGCTCAGCGGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2511593‑2511674‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagttcACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAATATACCGTGGTGAAGCTAATTTA > REL606/2511683‑2511757 CCTGCTCAGCGGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTC < 2:747735/76‑1 CTGCTCAGCGGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCC > 2:1264364/1‑76 TCAGCGGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTT < 1:1154406/76‑1 TCAGCGGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTT > 2:271287/1‑76 TCAGCGGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTT < 2:275388/76‑1 AGCGGGTTCTTGGTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCCGTTCA > 2:54304/1‑76 CGGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACG < 1:849190/76‑1 GGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATCACATCGATAAAGTCTTTCCAGTTCACGT > 1:233786/1‑76 GTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTC > 2:1256199/1‑76 GTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTC < 2:522083/76‑1 TTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCA < 2:763000/76‑1 TCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGACTAACTTCGAGAAAGTCTTTCCCGTTNACGTTCAA > 2:250029/1‑76 CTTGCTGGTTGTACGTCGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAAT < 1:35605/76‑1 TTGCTGTTTGTACTTTGTCTCAGGANTGACTTACGACGCATAACTTCNATATAGTCTTTCCAGTTCACGTTCAATC < 1:216189/76‑1 TTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATC > 2:1435233/1‑76 GCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATNAAGTCTTTCCAGTTCACGTTCAATCAT < 1:1300001/76‑1 GCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCAT < 2:521011/76‑1 GCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCAT < 1:866607/76‑1 CTGTTTGTACTTTGTCTCAGGAATTACTTGCGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATA < 1:749850/76‑1 CTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATA > 1:610431/1‑76 CTGTTTGTACTTTGTCTCAGGAATTACCTACAAANCATACCTNCGNTANAGTCCTTCGAGTTCACGTTCAATCATA > 1:1277222/1‑76 TGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAA < 1:354321/76‑1 GTTTGTAGTTTGTCGCAGGAATTACTTACGGAGCATAACCTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAAC < 1:33380/76‑1 TTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACA < 2:298165/76‑1 TTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACA < 1:90279/76‑1 TTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAA < 1:1038576/76‑1 TGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAAC > 1:542511/1‑76 GTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACC > 1:412673/1‑76 ACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTC > 2:289926/1‑76 TGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTT < 1:1122683/76‑1 TCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAA > 2:144811/1‑76 AGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATT > 2:996481/1‑76 GGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTA < 1:736274/76‑1 GGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTA < 1:684332/76‑1 AATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATG > 2:402866/1‑76 ATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGG > 1:461294/1‑76 TACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGT < 1:829304/76‑1 ACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTA < 2:112831/76‑1 CTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTAT > 1:377136/1‑76 TTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATT < 2:1327592/76‑1 TACGAAGCATAACTTCGATACAGTCTTTCCAGTTCACGTTCAATCATAACAACGTCTCTTATAATTATGGGTATTC > 2:121064/1‑76 AAGCATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACG > 1:513662/1‑76 ATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAA > 2:989820/1‑76 ATAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAA < 1:1362823/76‑1 TAACTTCGATAAAGTCTTTCCAGTTCANGTTCAATCCTAACAACCTCTCTTATAATTATGGGTATTCTACGGAAAC > 1:1292625/1‑76 TAACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAAC > 1:1154348/1‑76 ACTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAA < 1:355884/76‑1 CTTCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAAT > 1:590744/1‑76 TCGATAAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAATAT < 1:1115704/76‑1 AAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAATATACCGT < 1:1403938/76‑1 AAAGTCTTTCCAGTTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATACTACGGAAACAATATACCGT > 1:1467778/1‑76 AAGTCTTTCCAGTTAACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTTTACGGAAACAAGATACCGTG < 2:24973/76‑1 TTCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAATATACCGTTGTGAAGCTAATT < 2:513660/76‑1 TCACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAATATACCGTGGTGAAGCTAATTT < 1:303975/76‑1 CACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAATATACCGTGGTGAAGCTAATTTA > 1:570783/1‑76 CCTGCTCAGCGGGTTCTTGCTGTTTGTACTTTGTCTCAGGAATTACTTACGAAGCATAACTTCGATAAAGTCTTTCCAGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2511593‑2511674‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagttcACGTTCAATCATAACAACCTCTCTTATAATTATGGGTATTCTACGGAAACAATATACCGTGGTGAAGCTAATTTA > REL606/2511683‑2511757 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |