New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	570046 =	36 (0.790)	4 (0.090)	3/142	6.1	7.3%	intergenic (‑110/+569)	yhhI/ECB_00526	predicted transposase/hypothetical protein
	?	REL606	570481 =	67 (1.550)					intergenic (‑545/+134)	yhhI/ECB_00526	predicted transposase/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AATAAAAAACAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGGTGTAGCTA  >  REL606/569982‑570121                                                                 |                                                                            aaTAAAAAACAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGt                                                                  <  1:889967/76‑1 (MQ=31) aaTAAAAAACAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGt                                                                  <  1:889955/76‑1 (MQ=31) aaTAAAAAACAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGt                                                                  >  1:300996/1‑76 (MQ=31)   tAAAAAACAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGa                                                                <  2:1100343/76‑1 (MQ=34)      aaatCAGCTTCAGGTAATAAGGAATATCTCAATTTTTAGACATAAAATGCGAATTATTTAGTACAAAACGTGCACt                                                             >  2:1445534/1‑76 (MQ=11)       aaaCAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACtt                                                            <  1:243906/76‑1 (MQ=34)           aGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCtga                                                        >  1:1345347/1‑76 (MQ=34)              ttCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCtgatga                                                     <  2:402351/76‑1 (MQ=34)               tCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTgatgat                                                    >  2:815564/1‑76 (MQ=34)               tCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTgatgat                                                    <  2:1323387/76‑1 (MQ=34)               tCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTgatgat                                                    <  2:515534/76‑1 (MQ=34)                cAGGTAATACGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATc                                                   >  1:349035/1‑76 (MQ=21)                cAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATc                                                   >  2:1006407/1‑76 (MQ=34)                cAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATc                                                   >  1:349038/1‑76 (MQ=34)                 aGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCt                                                  >  1:994540/1‑76 (MQ=34)                    taataaGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCtttt                                               >  2:332347/1‑76 (MQ=35)                    taataaGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCtttt                                               >  2:332346/1‑76 (MQ=35)                     aataaGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTc                                              >  2:1296048/1‑76 (MQ=38)                             atatCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTaa                                      >  2:1262408/1‑76 (MQ=40)                             atatCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTaa                                      >  2:1351195/1‑76 (MQ=40)                                  tcAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATcc                                 <  2:863340/76‑1 (MQ=255)                                   cAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTNAATATCCa                                <  1:1417953/76‑1 (MQ=255)                                         ttAAACATAAAATGCGAATGATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGcatc                          >  1:1258061/1‑76 (MQ=255)                                          tAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGcatca                         <  1:193955/76‑1 (MQ=255)                                           aaaCATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGcatcat                        <  2:597998/76‑1 (MQ=255)                                              cATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGtt                     <  2:1333686/76‑1 (MQ=255)                                               aTAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTa                    >  1:397141/1‑76 (MQ=255)                                                     tGCGAATTATTTAGTACAAAAAGTGAACTTCTGACGATCTTNTCCTGGTTAATATCCAGGNATNATGTTACGTGAc              >  1:1202934/1‑76 (MQ=255)                                                         aaTTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATgg          >  2:1107123/1‑76 (MQ=255)                                                          attattTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGgt         <  2:1312688/76‑1 (MQ=255)                                                          attattTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGgt         <  1:1006409/76‑1 (MQ=255)                                                            tattTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGgtgt       >  2:1395394/1‑76 (MQ=255)                                                            tattTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGgtgt       >  1:808290/1‑76 (MQ=255)                                                            tattTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGgtgt       >  2:725289/1‑76 (MQ=255)                                                            tattTAGTACAAAAAGTGAACTTCGGATNTTCTTTTCCTTGTTAATATACNGGCATCATGTTACGTGACATGgtgt       >  1:221896/1‑76 (MQ=25)                                                             attTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGGTGTa      <  2:1371974/76‑1 (MQ=255)                                                                 aGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGGTGTAGCTa  <  2:881607/76‑1 (MQ=255)                                                                 aGTACAAAAAGTGAACTTCNGNTGATCTTNTCCTGGTTAATATCCAGGCATNATNTTCCGTGACATGGTGTAGCTa  <  2:214840/76‑1 (MQ=37)                                                                 |                                                                            AATAAAAAACAGCTTCAGGTAATAAGGAATATCTCAATTTTTAAACATAAAATGCGAATTATTTAGTACAAAAAGTGAACTTCTGATGATCTTTTCCTGGTTAATATCCAGGCATCATGTTACGTGACATGGTGTAGCTA  >  REL606/569982‑570121

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.