| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 4012408 = | 265 (1.090) | 7 (0.030) | 3/144 | 17.6 | 2.8% | coding (891/1452 nt) | trkH | potassium transporter |
| ? | REL606 | 4012660 = | 235 (1.000) | coding (1143/1452 nt) | trkH | potassium transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/4012485‑4012408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATT > REL606/4012660‑4012734 GTTGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGCACTGT > 2:1215477/1‑76GTTGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGT < 2:5757496/76‑1GTTGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGT > 2:182203/1‑76 TTGTAACCCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTA < 2:2871532/76‑1 TTGTAAACCCGGCGGTTGTCGCCATCGCAACCACCTGGGAAAACGCCTGGGTAATTGTCATCAGCGCCGAAATGTA > 2:2087219/1‑76 TTGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTA < 1:6055221/76‑1 TGTAACCCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG < 2:6572894/76‑1 TGTAAACCCGGCGGTTTTCGCCAACGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG > 2:5771451/1‑76 TGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG > 2:793547/1‑76 TGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG < 2:723549/76‑1 TGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG > 2:229257/1‑76 TGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG < 1:902235/76‑1 TGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG < 1:6063125/76‑1 TGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG > 1:5856567/1‑76 TGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG < 1:4385354/76‑1 GGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAGCATTAAGCT < 2:2672889/76‑1 CAGCGCCGAACTGTAGCATTAAGCTGGGGCATCGCGCACTG > 1:2729963/1‑41 CAGCGCCGAACTGTAGCATTAAGCTGGGGCATCGCGCACTG > 1:3447701/1‑41 CAGCGCCGAACTGTAGCATTAAGCTGGGGCATCGCGCACTG < 2:4283654/41‑1 CAGCGCCGAACTGTAGCATTAAGCTGGGGCATCGCGCACTG < 2:3447701/41‑1 CAGCGCCGAACTGTAGCATTAAGCTGGGGCATCGCGCACTG < 2:2729963/41‑1 CAGCGCCGAACTGTAGCATTAAGCTGGGGCATCGCGCACTG > 1:4283654/1‑41 TAGCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCA < 1:113140/76‑1 TAGCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCA < 2:2714819/76‑1 TAGCATTAAGCGGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCA < 1:7171047/76‑1 AGCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCct > 1:2531385/1‑74 AGCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCAT > 2:567244/1‑76 AGCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCAT > 2:7104155/1‑76 AGCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCAT > 1:7779075/1‑76 GCATTAGGCTGGGGCAGCGCGCACTGCGGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATT < 2:1236928/76‑1 GCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATT < 1:5740830/76‑1 GCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATT < 1:3036497/76‑1 GCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATT < 2:7781653/76‑1 GTTGTAAACCCGGCGGTTGTCGCCATCGACACCACCTGGAAAAACGCCTGGTTAATTGTCATCAGCGCCGAACTGTAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/4012485‑4012408‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagCATTAAGCTGGGGCATCGCGCACTGCCGGAACGTATCCTCGAAGCCGTTTGGGGATTTTTCTCCGCCTATGCATT > REL606/4012660‑4012734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |