| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 462516 = | 160 (0.660) | 3 (0.010) | 3/134 | 17.0 | 1.5% | coding (364/528 nt) | priC | primosomal replication protein N'' |
| ? | REL606 | = 684651 | 262 (1.200) | coding (196/1149 nt) | nagA | N‑acetylglucosamine‑6‑phosphate deacetylase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 163 total aligned reads displayed.
GATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTC > REL606/462441‑462591 | gATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAg < 2:3693153/76‑1 (MQ=255) aTGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgc > 2:2044080/1‑76 (MQ=255) tGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgcc < 1:3767708/76‑1 (MQ=255) tGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgcc < 2:3580470/76‑1 (MQ=255) tGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgcc < 1:6850966/76‑1 (MQ=255) gCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgccg < 1:1733535/76‑1 (MQ=255) gCAGCGTTTGCGGTTCCACGAGATCGGTCCCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgccg < 2:2926198/76‑1 (MQ=255) cAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgccgc > 1:1007655/1‑76 (MQ=255) ggCGTTGGCTGTCCCACGAGATCGGTCCCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgccgcc < 2:6187013/75‑1 (MQ=255) aGCTTTTGCTGTTCCCGGAGATCGGTCCCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgccgcc < 2:5928208/76‑1 (MQ=255) aGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAgccgcc > 2:1206710/1‑76 (MQ=255) cGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCcgccgc > 2:3841253/1‑76 (MQ=255) cGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCcgccgc > 2:1081661/1‑76 (MQ=255) gTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCt > 1:499509/1‑76 (MQ=255) tttGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTc > 2:1146378/1‑76 (MQ=255) ttGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCa > 2:1243106/1‑76 (MQ=255) ttGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCa > 2:6655433/1‑76 (MQ=255) ttGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCa > 2:3185897/1‑76 (MQ=255) gCTTTTCCAGGAGCGCGGCCCCCCGCGCCAGAGGGCCTCTGCGTTCGG‑CACCCATCCCACGTAGCCGCCGCTCaaa < 2:7140426/76‑1 (MQ=255) cTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCaaaa > 2:3450629/1‑76 (MQ=255) cTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCaaaa > 1:5479380/1‑76 (MQ=255) cTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCaaaa > 2:2305374/1‑76 (MQ=255) tGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAAt > 1:3702954/1‑76 (MQ=255) tGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGCAGCCGCCGCTCAAAAt > 1:665622/1‑76 (MQ=255) ttcccACGAGACCGGCCCCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATc < 1:914547/73‑1 (MQ=255) ttCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATcc > 1:4517191/1‑76 (MQ=255) ttCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATcc > 2:4662347/1‑76 (MQ=255) ttCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATcc > 2:7519489/1‑76 (MQ=255) ttCCACGAGAGCGGCCCCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCACACGTAGCCGCCGCTCAAAATcc < 1:1888779/76‑1 (MQ=255) tCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCt > 1:461256/1‑76 (MQ=255) tCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCt > 1:2195822/1‑76 (MQ=255) ccgcGAGATGGGTCCCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTg < 1:324382/73‑1 (MQ=255) ccACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTg > 2:4865711/1‑76 (MQ=255) ccACGAGACCGGTCCCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTg < 1:7289575/76‑1 (MQ=255) cACGAGATCGGGCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGa > 2:6681574/1‑76 (MQ=255) aCGAGATCGGTCCCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGAt < 2:3660809/76‑1 (MQ=255) aCGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGAt > 2:2612389/1‑76 (MQ=255) gagaTCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGc > 2:177011/1‑76 (MQ=255) gaTCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTg > 2:6165928/1‑76 (MQ=255) aTCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGa > 2:934741/1‑76 (MQ=255) tCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGaa > 2:7343631/1‑76 (MQ=255) tCGCTCCCCCGCGCGAGTCGGGCTCTTGTTTCGC‑CACCCATCCCACCTGGCCGCCGCTCAAAATCCTGATGCTGaa < 2:5306475/76‑1 (MQ=255) cGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAAt > 1:2467098/1‑76 (MQ=255) gTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATAc > 2:6904573/1‑76 (MQ=255) tcccccGCACCGGACGGCCTCTGCGTTCGC‑CAACAATCGCACGGAGCCGCCGCTCAAAATCCTGATGCTGAATACg < 1:3526287/73‑1 (MQ=255) gcgcccGCGCCAGCCGGCCTC‑GCCTTCGGTGAGCCATCGCACGACCCCGCCGCTCAAAACCCTGATGCTGAATACg < 2:5881596/73‑1 (MQ=255) cACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGt > 1:1737071/1‑76 (MQ=255) cACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGt > 1:192254/1‑76 (MQ=255) cACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGt > 1:5182092/1‑76 (MQ=255) cACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGt > 2:6490988/1‑76 (MQ=255) ccccGCCCCAGCGGGGCTCTGCTTTCGG‑CACCCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGtt < 2:2459459/75‑1 (MQ=255) aCCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGtt > 2:15734/1‑76 (MQ=255) cccGCGCAAGGCGGGCTGGGCTTTCGG‑CAACCCTCCCCCGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGttt < 2:4458066/76‑1 (MQ=255) cgcgCCAGACGGGCTCGGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTAc < 1:1546584/76‑1 (MQ=255) gcgcCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACg > 2:4503459/1‑76 (MQ=255) ccAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTg > 2:2917569/1‑76 (MQ=255) ccAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTg > 1:5380813/1‑76 (MQ=255) ccAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTg > 2:5710346/1‑76 (MQ=255) ccAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTg > 2:7757796/1‑76 (MQ=255) agccGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGcc < 1:238649/73‑1 (MQ=255) aGACGGGCTCTGCGTTCGG‑CAACCATCTCACGAAGGCGCTGCGCAAAATCCTGATGCTGAATACGTTTACGCTGcc > 2:1571647/1‑76 (MQ=255) ggcGGCCTCTCCGTCCGG‑CACCCATCTCTCGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCa < 2:2886409/74‑1 (MQ=255) gaggggCTGTGCGTTCGG‑CAACCATCTCCCGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCa < 2:5655060/73‑1 (MQ=255) gACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCa > 2:5846939/1‑76 (MQ=255) gACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCa > 2:5283745/1‑76 (MQ=255) gACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCa > 1:7690036/1‑76 (MQ=255) ccGGGCTCTGCGTTGGG‑CACCCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAg < 1:6494460/75‑1 (MQ=255) aCGGGCTCTGCTTTCGG‑CACCCACCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAg < 1:3389057/76‑1 (MQ=255) gggCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCCGCCcgcg > 2:6870128/1‑76 (MQ=255) ggcctcgGCGTCCGC‑CACCCATCCCACGTACCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCg < 2:6088148/73‑1 (MQ=255) gcctctGCGTTCGC‑CAACCACCCCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCgg < 1:300164/74‑1 (MQ=255) gCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCggg > 1:6949227/1‑76 (MQ=255) gCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCggg > 2:657887/1‑76 (MQ=255) tcggCGTTCGG‑CACCCATCTCACGAAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCa < 1:2777045/73‑1 (MQ=255) ctGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCaa > 2:5170415/1‑76 (MQ=255) ctGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCaa > 1:6750539/1‑76 (MQ=255) ctGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCaa > 2:3628489/1‑76 (MQ=255) tGCGTTCGG‑CACCCTGCTCGCGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAAt < 1:5308825/76‑1 (MQ=255) tGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAAt > 1:5956640/1‑76 (MQ=255) gCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAAtt > 1:5331954/1‑76 (MQ=255) gCGTCCGG‑CAACCTTCCCGGGTACCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAAtt < 2:463634/76‑1 (MQ=255) tCGG‑CACCCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCg < 1:7531989/76‑1 (MQ=255) aaCCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCggcggt > 2:4894508/1‑76 (MQ=255) cccATCTCCCGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGgtggtg < 1:629113/75‑1 (MQ=255) aCCATCCCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGgtggtg < 1:1850685/76‑1 (MQ=255) cATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCa > 2:1397215/1‑76 (MQ=255) tcACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGt > 1:5778845/1‑76 (MQ=255) cACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTc > 1:7314010/1‑76 (MQ=255) cACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTc > 2:7007355/1‑76 (MQ=255) aCGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTcc < 2:653845/76‑1 (MQ=255) aCGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGGGCACTGccc > 2:5182186/1‑76 (MQ=255) cGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTccc > 1:6917593/1‑76 (MQ=255) cGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTccc > 2:3734714/1‑76 (MQ=255) gtcgccgccGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCa < 2:5627768/73‑1 (MQ=255) gTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCa > 2:7418493/1‑76 (MQ=255) tAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCAc > 1:6971454/1‑76 (MQ=255) aGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACt > 1:407044/1‑76 (MQ=255) aGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACt > 2:539368/1‑76 (MQ=255) gccgccGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTc < 1:7782077/76‑1 (MQ=255) gccgccGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTc < 1:345607/76‑1 (MQ=255) | GATGCAGCGTTTGCTGTTCCACGAGATCGGTCACCCGCGCCAGACGGGCTCTGCGTTCGG‑CAACCATCTCACGTAGCCGCCGCTCAAAATCCTGATGCTGAATACGTTTACGCTGCCAGCGGGCAATTTTCGGTGGTGCACTGTCCCACTC > REL606/462441‑462591 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |