BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	REL606	3,147,685	C→T	R608C (CGT→TGT)	rpoD →	RNA polymerase sigma factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	REL606	3,147,685	0	C	T	100.0%	538.9 / NA	134	R608C (CGT→TGT)	rpoD	RNA polymerase sigma factor
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (91/43); total (91/43)

Only 100 of 148 total aligned reads displayed.

CCGCGAACGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCAC  >  REL606/3147612‑3147757

ccGCGAAGGTATCCGAAAGACGAAAGCGAGGG‑CGCGGCCAAAACGGCGTCCCCGGAGCCGTTCTGAAGTGCTgtgt                                                                        <  2:5501013/76‑1 (MQ=255)

ccGCGAACGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTgtgt                                                                        >  2:5962543/1‑76 (MQ=255)

  gcgAACGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAg                                                                      >  2:3035847/1‑76 (MQ=255)

   cgAACGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGc                                                                     >  2:4870418/1‑76 (MQ=255)

   cgAACGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGc                                                                     >  2:1809957/1‑76 (MQ=255)

    gAACGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCt                                                                    >  2:7249876/1‑76 (MQ=255)

      aCGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGTAGTGCTGTGTAGCTTc                                                                  >  1:3700239/1‑76 (MQ=255)

       cGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCGGAGCCGTTCTGAAGTGCTGTGTAGCTTcc                                                                 >  2:7360905/1‑76 (MQ=255)

       cGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTcc                                                                 >  1:3841271/1‑76 (MQ=255)

       cGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTcc                                                                 >  2:2289687/1‑76 (MQ=255)

       cGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTcc                                                                 >  2:1488427/1‑76 (MQ=255)

        gTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCt                                                                >  2:7564741/1‑76 (MQ=255)

        gTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCt                                                                >  1:6335878/1‑76 (MQ=255)

        gTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTCCCt                                                                >  1:5701937/1‑76 (MQ=255)

         tATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTg                                                               >  1:4657893/1‑76 (MQ=255)

         tATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTg                                                               >  1:1211321/1‑76 (MQ=255)

          aTCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTgg                                                              >  1:7596306/1‑76 (MQ=255)

          aTCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTgg                                                              >  1:3109410/1‑76 (MQ=255)

          aTCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTgg                                                              >  1:7348852/1‑76 (MQ=255)

           tCCGTAAGAGAGAAGGAAGGG‑CCCTGCACAACCGGCGCCCCGGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGa                                                             <  2:3233561/76‑1 (MQ=255)

           tCCGACAGACGGAAGCGAGGG‑GGCGGCGCAAACTGCGCCGCGGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGa                                                             <  1:7103795/76‑1 (MQ=255)

            ccGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGAc                                                            >  1:111249/1‑76 (MQ=255)

              gTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGa                                                          >  2:4617131/1‑76 (MQ=255)

              gTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCCGGACGa                                                          >  2:906614/1‑76 (MQ=255)

                cAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGAtt                                                        >  1:7796148/1‑76 (MQ=255)

                aaGACCGAAGCGAAGG‑CGCGGCGAAACCTGCGCCCCGGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGAtt                                                        <  1:7536310/75‑1 (MQ=255)

                 aGATCGAAGCGAGGG‑CGCTGCGAAAACTGCGCCCCCGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTa                                                       <  2:404407/76‑1 (MQ=255)

                 aGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTa                                                       >  1:444488/1‑76 (MQ=255)

                 aGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTa                                                       >  1:1754226/1‑76 (MQ=255)

                  gATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTaa                                                      >  1:3026866/1‑76 (MQ=255)

                    tCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATc                                                    >  1:4862858/1‑76 (MQ=255)

                     cgaagcgaagG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCg                                                   >  1:1519866/1‑76 (MQ=255)

                      gaagggaggG‑CGCGGCCAAACCGGCGCCCCCGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCgg                                                  <  1:6205485/76‑1 (MQ=255)

                      gaagcgaagG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCgg                                                  >  2:54207/1‑76 (MQ=255)

                       aagcgaggG‑CGCGGCGAAACCTGCGCCCCCGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGt                                                 <  2:5156635/76‑1 (MQ=255)

                       aagcgaagG‑CGCTGCGCAACCGGCGCCCCGGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGt                                                 <  1:7031986/76‑1 (MQ=255)

                       aagcgaagG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGt                                                 >  2:4810712/1‑76 (MQ=255)

                        aaggaagGCCGCTGCGCAACCTGCGCCCCGGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGt                                                 <  1:3285973/73‑1 (MQ=255)

                           gaagG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGc                                             >  2:664841/1‑76 (MQ=255)

                            aagG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGcg                                            >  1:1478015/1‑75 (MQ=255)

                            aagG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGcc                                            >  2:5324113/1‑76 (MQ=255)

                            aagG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGcc                                            >  1:6325815/1‑76 (MQ=255)

                            aagG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGcc                                            >  2:2184966/1‑76 (MQ=255)

                             agG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCg                                           >  1:2137520/1‑76 (MQ=255)

                                 cgcgGCGCAACCTGCGCCCCGGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGAt                                        <  2:4217724/76‑1 (MQ=255)

                                  gcTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGGCGGATc                                       >  1:4177156/1‑76 (MQ=255)

                                   cTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCa                                      >  2:3864073/1‑76 (MQ=255)

                                     gcgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAgg                                    >  2:7293210/1‑76 (MQ=255)

                                      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGc                                   >  1:1266152/1‑76 (MQ=255)

                                      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGc                                   >  2:4166553/1‑76 (MQ=255)

                                      cgcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGc                                   >  1:2748997/1‑76 (MQ=255)

                                       gcAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCg                                  >  2:6624632/1‑76 (MQ=255)

                                        cAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGt                                 >  1:3204134/1‑76 (MQ=255)

                                         aaaCTGCGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGtt                                >  2:1739969/1‑76 (MQ=255)

                                          accTGCGCCACCGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTa                               <  2:6673772/74‑1 (MQ=255)

                                           ccTGCGCCCCCGGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTAc                              <  1:5808625/75‑1 (MQ=255)

                                               cGTCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAAGCGTTAcgccg                          >  2:1080906/1‑76 (MQ=255)

                                                 tCACCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCa                        >  2:6829056/1‑76 (MQ=255)

                                                   ccccGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCAcc                      <  2:2539927/75‑1 (MQ=255)

                                                   aCCCGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCAcc                      >  2:6677185/1‑76 (MQ=255)

                                                    ggggAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCAccc                     <  2:6837550/73‑1 (MQ=255)

                                                    cgggAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCAccc                     <  2:4094431/73‑1 (MQ=255)

                                                     cggAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCg                    <  1:6576800/74‑1 (MQ=255)

                                                     cggAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCg                    <  1:813642/74‑1 (MQ=255)

                                                     ccGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCg                    >  2:1162931/1‑76 (MQ=255)

                                                      ggAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCgg                   <  2:5530663/75‑1 (MQ=255)

                                                      cGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCgg                   >  1:5559031/1‑76 (MQ=255)

                                                      cGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCgg                   >  1:7661650/1‑76 (MQ=255)

                                                      cGAGCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCgg                   >  2:1407648/1‑76 (MQ=255)

                                                         gCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCAc                <  1:4342489/76‑1 (MQ=255)

                                                         gCCGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCAc                <  1:4968405/76‑1 (MQ=255)

                                                          ccGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACt               <  1:6821099/76‑1 (MQ=255)

                                                          ccGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACt               >  2:3795540/1‑76 (MQ=255)

                                                          ccGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAAGCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACt               <  2:1504807/76‑1 (MQ=255)

                                                           cGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTa              >  1:7481113/1‑76 (MQ=255)

                                                           cGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTa              <  2:6335878/76‑1 (MQ=255)

                                                           cGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTa              <  1:2344422/76‑1 (MQ=255)

                                                           cGTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTa              <  1:1422078/76‑1 (MQ=255)

                                                            gTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAg             <  2:4735093/76‑1 (MQ=255)

                                                            gTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAg             >  1:5934962/1‑76 (MQ=255)

                                                            gTTCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAg             >  1:2901177/1‑76 (MQ=255)

                                                             ttCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAgg            >  1:3577960/1‑76 (MQ=255)

                                                             ttCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAgg            >  1:4043050/1‑76 (MQ=255)

                                                             ttCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAgg            >  1:6799362/1‑76 (MQ=255)

                                                              tCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc           >  1:6671181/1‑76 (MQ=255)

                                                              tCTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGc           >  2:2399675/1‑76 (MQ=255)

                                                               cTGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGcc          <  2:7168209/76‑1 (MQ=255)

                                                                tGAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGccc         >  2:2713511/1‑76 (MQ=255)

                                                                 gAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCct        >  1:2769333/1‑76 (MQ=255)

                                                                 gAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCct        >  2:5186787/1‑76 (MQ=255)

                                                                 gAAGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCct        >  1:2414664/1‑76 (MQ=255)

                                                                  aaGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCctc       <  2:3362560/76‑1 (MQ=255)

                                                                  aaGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCctc       >  2:4567660/1‑76 (MQ=255)

                                                                   aGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCctct      <  2:6219545/76‑1 (MQ=255)

                                                                   aGTGCTGTGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCctct      >  1:2963734/1‑76 (MQ=255)

                                                                     tgctgtGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGc    >  1:5577401/1‑76 (MQ=255)

                                                                     tgctgtGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGc    >  1:1664266/1‑76 (MQ=255)

                                                                      gctgtGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGca   >  2:5849635/1‑76 (MQ=255)

                                                                       ctgtGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac  <  1:4549024/76‑1 (MQ=255)

                                                                       ctgtGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGcac  >  2:1086282/1‑76 (MQ=255)

CCGCGAACGTATCCGTCAGATCGAAGCGAAGG‑CGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAATCGGTAGGCCGGATCAGGCGTTACGCCGCACCCGGCACTAGGCCCTCTGCAC  >  REL606/3147612‑3147757

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`