| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1508528 | 214 (0.900) | 4 (0.020) | 3/142 | 22.5 | 1.7% | coding (354/846 nt) | nhoA | N‑hydroxyarylamine O‑acetyltransferase |
| ? | REL606 | = 3966877 | 247 (1.100) | coding (358/381 nt) | yigF | conserved inner membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 217 total aligned reads displayed.
CGTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCAGACC > REL606/1508453‑1508603 | cgTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGaaaaa > 2:1548769/1‑76 (MQ=255)cgTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGaaaaa < 2:583496/76‑1 (MQ=255) gTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAAt < 2:7389968/76‑1 (MQ=255) gTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAAt < 2:7133680/76‑1 (MQ=255) gTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAAt < 2:2708444/76‑1 (MQ=255) tAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATg > 1:5815971/1‑76 (MQ=255) tAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATg > 1:5433079/1‑76 (MQ=255) tAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATg < 2:2211522/76‑1 (MQ=255) tAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATg > 2:280213/1‑76 (MQ=255) tAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATg < 1:4513540/76‑1 (MQ=255) aGTTTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATgg < 2:294568/76‑1 (MQ=255) aGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATgg < 2:812836/76‑1 (MQ=255) aGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATgg < 1:7059555/76‑1 (MQ=255) aGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATgg > 1:6336180/1‑76 (MQ=255) aGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATgg < 2:4982371/76‑1 (MQ=255) aGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATgg < 2:6435720/76‑1 (MQ=255) tgtTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGAt < 1:4164263/76‑1 (MQ=255) gtTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGAtt > 1:6969021/1‑76 (MQ=255) ttATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTg < 1:1750792/76‑1 (MQ=255) ttATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTg > 1:4846230/1‑76 (MQ=255) tATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGc < 1:6297034/76‑1 (MQ=255) aTCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCt > 1:7289088/1‑76 (MQ=255) aTCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCt > 2:7606239/1‑76 (MQ=255) tCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTg > 1:554964/1‑76 (MQ=255) tCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTg < 1:723133/76‑1 (MQ=255) tCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTg < 2:3678752/76‑1 (MQ=255) cAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGa < 2:7365879/76‑1 (MQ=255) aaaTCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGAt > 2:4860853/1‑76 (MQ=255) aaaTCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGAt < 1:2765899/76‑1 (MQ=255) aaaTCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGAt < 2:2895772/76‑1 (MQ=255) ccGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCg < 1:5155892/76‑1 (MQ=255) gCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGt > 2:7330527/1‑76 (MQ=255) gCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGt > 2:1903003/1‑76 (MQ=255) ccAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGtt > 1:6846647/1‑76 (MQ=255) cAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGttt < 2:1056157/76‑1 (MQ=255) cAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGttt > 1:5609849/1‑76 (MQ=255) cAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGttt < 2:3187506/76‑1 (MQ=255) cAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGttt > 1:407290/1‑76 (MQ=255) cATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCgg > 2:6658568/1‑76 (MQ=255) cATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCgg < 1:6134322/76‑1 (MQ=255) aTTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGCTGTCGGTTTCTGt > 2:261984/1‑76 (MQ=255) aTTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGt > 2:6791564/1‑76 (MQ=255) aTTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGt < 1:3134791/76‑1 (MQ=255) ttACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTg > 2:2115823/1‑76 (MQ=255) aCCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTggg > 2:1872196/1‑76 (MQ=255) ccgccgCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGc < 2:130359/76‑1 (MQ=255) ccgccgCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGc < 1:2890713/76‑1 (MQ=255) gccgcGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAg < 1:1022711/76‑1 (MQ=255) gccgcGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAg > 1:5208733/1‑76 (MQ=255) ccgcGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGa < 1:1680029/76‑1 (MQ=255) cgcgCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGAAGAc < 2:5131619/76‑1 (MQ=255) gcgcACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACg < 1:6573574/76‑1 (MQ=255) gcccccATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCt < 2:2907698/73‑1 (MQ=255) cACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCCGACGcga > 2:1624425/1‑74 (MQ=255) cACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTa > 1:1890379/1‑76 (MQ=255) cACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTa > 1:2988888/1‑76 (MQ=255) cACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTa > 1:3570684/1‑76 (MQ=255) aCCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTaa > 2:533019/1‑76 (MQ=255) aCCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTaa > 2:556654/1‑76 (MQ=255) ccATCGTTTGATGTTGATGGAAATGGAAGAGTAAAAATGGTTTGCTGATGCCGCTTTAGTTGGGCAGACGCTAAcc < 2:2569180/76‑1 (MQ=255) cATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGTTTTCGGTGGGCAGACGCTAACcg < 2:602861/76‑1 (MQ=255) cATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACcg > 1:7515443/1‑76 (MQ=255) tCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACcgcg < 1:2902785/76‑1 (MQ=255) tttGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCg > 1:3970492/1‑76 (MQ=255) tttGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCg > 2:3753188/1‑76 (MQ=255) ttGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAAACGCGCCgg > 2:7475729/1‑75 (MQ=255) tGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGTTTTCGGTGGGCAGACGCTAACCGCGCCGAt < 1:7171007/76‑1 (MQ=255) cTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTc > 2:4750097/1‑76 (MQ=255) tGTTGGTGGAACTGGGAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCCGACGCTAAACGCGCCGATTCg > 2:6339219/1‑76 (MQ=255) tGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCg > 1:4601301/1‑76 (MQ=255) tGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCg > 2:1176374/1‑76 (MQ=255) gtttGGTGGAACTGGAAGAGGAAAAATGGATTGCGGATGTCGGTTTGGGTGGGCAGACGCTAACCGCGCCGATTCg < 2:5108526/74‑1 (MQ=255) tggtggAACTGGAAGAGTAAAATTGGATTGCGGATGTTGTTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGttt < 1:1556701/76‑1 (MQ=255) gtggAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAg < 1:2041871/76‑1 (MQ=255) gtggAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAg > 2:5308288/1‑76 (MQ=255) gtggAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAg > 2:5008250/1‑76 (MQ=255) gtggAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAg < 1:4647997/76‑1 (MQ=255) gtggAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGAATCGTTTAg > 1:4290617/1‑76 (MQ=255) tggAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGt > 1:1802185/1‑76 (MQ=255) ggAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGtt > 1:6097082/1‑76 (MQ=255) ggAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGAATCGTTTAggt > 2:585891/1‑74 (MQ=255) ggAACTGAAAGAGAAAAAATGGATTGCGGTTGTCGTGTTCGGTGGCCAGACGCTAACCGCGCCGATTCGTTTAGtt < 2:5215581/76‑1 (MQ=255) gAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGACTCGTTTAGttt > 2:4045071/1‑76 (MQ=255) tGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGa > 2:7597772/1‑76 (MQ=255) tGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGa > 1:207568/1‑76 (MQ=255) ggAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGTTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGAt < 1:1505730/76‑1 (MQ=255) ggAAGAGGAAAAAGGGATTGCTGATGTCGGTTGCGGTGGCCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGAt < 2:3880681/76‑1 (MQ=255) gAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAATTTCCGAtc > 2:4007155/1‑76 (MQ=255) aaGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGAtcc > 1:5910170/1‑75 (MQ=255) gagGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCg < 1:2382282/76‑1 (MQ=255) agGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGt > 2:5643615/1‑76 (MQ=255) ggAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTg < 1:6033142/76‑1 (MQ=255) gAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGc < 1:1168079/76‑1 (MQ=255) aaaaaTGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCa > 1:7354131/1‑76 (MQ=255) aaaaTGGATTGCTGTTGTCGGTTTGGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCAg < 2:6752848/76‑1 (MQ=255) aaaaTGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTTCGATCTCGTGCAg > 1:2203287/1‑76 (MQ=255) aaaaTGGATTGCTGATGTCGGTTTCGGTGGCCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCAg < 2:6278150/76‑1 (MQ=255) aaaaTGGATTGCGGATGTCGGTTTCGGGGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCAg < 2:5375656/76‑1 (MQ=255) aaTGGATTGCTGATGTCGGTTTCGGTGGGCAGGCGCTAAACGCGCAGCTTCGGTTAGGTTCCGATCTCGTGCacac > 1:4531960/1‑76 (MQ=255) aaTGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCAGAc < 2:5691813/76‑1 (MQ=255) | CGTAGTGTTATCAAATCCGCCAGCATTACCGCCGCGCACCCATCGTTTGCTGTTGGTGGAACTGGAAGAGGAAAAATGGATTGCTGATGTCGGTTTCGGTGGGCAGACGCTAACCGCGCCGATTCGTTTAGTTTCCGATCTCGTGCAGACC > REL606/1508453‑1508603 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |