| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1128081 | 150 (0.630) | 135 (0.570) | 3/150 | 23.1 | 33.5% | intergenic (+106/‑67) | mdoH/yceK | glucosyltransferase MdoH/predicted lipoprotein |
| ? | REL606 | = 2583282 | 386 (1.630) | coding (741/741 nt) | yfhQ | predicted methyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 386 total aligned reads displayed.
GCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTT > REL606/2583208‑2583357 | gCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt < 2:3304305/76‑1 (MQ=31) ccTTATCCGCCCTAGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTa < 2:605088/76‑1 (MQ=255) ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTa < 2:2359354/76‑1 (MQ=32) cTTATCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:5787164/76‑1 (MQ=21) cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAt < 2:195477/76‑1 (MQ=34) ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtt < 2:3715006/76‑1 (MQ=35) tATCGGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTc < 1:42308/76‑1 (MQ=255) tATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTc > 1:901873/1‑76 (MQ=38) tATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTc < 2:3549010/76‑1 (MQ=38) aTCCGCCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg < 2:3053982/76‑1 (MQ=255) aTCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg < 1:5579426/76‑1 (MQ=39) tCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg < 2:2022412/76‑1 (MQ=40) tCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg < 2:5389519/76‑1 (MQ=40) ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGc < 2:4615978/76‑1 (MQ=255) cGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTACTCGGcc > 2:3820777/1‑76 (MQ=255) aCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt < 2:3441016/76‑1 (MQ=255) aCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCtt < 1:1201182/76‑1 (MQ=255) ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTg < 2:1095753/76‑1 (MQ=255) ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTg > 2:655541/1‑76 (MQ=255) cTACGGTTCTGTTCACTGTAGGCCTTATAAGACGCATTGCGCGTCGCATCCGGCAACGGCTGTTATTCGGCCTTGt < 1:6610260/76‑1 (MQ=17) cTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTTGGCCTTGt > 2:4333050/1‑76 (MQ=255) aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa < 1:5884345/76‑1 (MQ=255) aCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa > 1:7591939/1‑76 (MQ=255) cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAc < 2:3161654/76‑1 (MQ=255) cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCTGCCTTGTTat > 2:292745/1‑75 (MQ=255) tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCttt < 1:2436730/76‑1 (MQ=255) cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa < 1:7376176/76‑1 (MQ=255) cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa < 2:885195/76‑1 (MQ=255) cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa < 1:72591/76‑1 (MQ=255) tGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt < 2:2588136/76‑1 (MQ=255) gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAtt < 2:6915995/76‑1 (MQ=255) ttCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTTGGCCTTGTTAACCTTAttt > 2:7532421/1‑75 (MQ=17) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTTCCTTTATTctg > 1:6412263/1‑76 (MQ=255) cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg < 2:5509273/76‑1 (MQ=255) tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTTCCTTTATTctgctg > 1:1378907/1‑76 (MQ=255) tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTcttctg > 2:591805/1‑76 (MQ=255) tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGGTATTCGGCCTTGTTACCTTTATTctgctg > 1:4888510/1‑76 (MQ=255) gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCtgctgc > 1:1706283/1‑76 (MQ=255) aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTTGGCCTTGTTACCTTTATTCTGCTGCTc > 2:219188/1‑76 (MQ=255) aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTTTTTACTTTTTTctgctggtt > 2:182960/1‑73 (MQ=18) aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc > 2:2711984/1‑76 (MQ=255) aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCCGCCCTGTTACCTTTATTCTGCTGCTc > 2:1732167/1‑76 (MQ=255) gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCaa < 1:346665/76‑1 (MQ=255) gCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCCTTATTCTGCTGCTCaa > 2:4263301/1‑76 (MQ=255) cTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa < 1:4515935/76‑1 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTTCGCCTTTTTACCTTTATTCTGCTGCTCAATAg > 1:507516/1‑76 (MQ=25) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg > 2:767810/1‑76 (MQ=255) tGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAg > 1:4345200/1‑76 (MQ=255) gATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa > 2:6369338/1‑76 (MQ=255) aTAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGaa < 1:7643457/76‑1 (MQ=255) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg < 2:5672657/76‑1 (MQ=255) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg < 1:1470120/76‑1 (MQ=255) tAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg < 1:6200451/76‑1 (MQ=255) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTTTTCGGCCCTGGTAACCTTTTTCCGCTGCTCAATTGAAGc > 2:3900554/1‑76 (MQ=18) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTTCCTTTATTCTGCTGCTCAATAGAAGc > 2:699670/1‑76 (MQ=255) aaGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGc > 2:2467567/1‑76 (MQ=255) aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 1:2990595/76‑1 (MQ=255) aGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGcc < 2:5743783/76‑1 (MQ=255) gACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCa < 2:1027894/76‑1 (MQ=255) aCGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg < 2:7097054/76‑1 (MQ=255) aCGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg < 1:2163313/76‑1 (MQ=255) cGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa < 1:2668375/76‑1 (MQ=255) cGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa < 1:5727885/76‑1 (MQ=255) gCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGaa < 2:3995358/76‑1 (MQ=255) gCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGaa < 2:4131982/76‑1 (MQ=255) gCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGaa < 1:5499854/76‑1 (MQ=255) cATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt < 1:3952443/76‑1 (MQ=255) cATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt < 2:1364362/76‑1 (MQ=255) aTTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATc > 1:7112145/1‑76 (MQ=255) tACGCGTCGCATCAGGCAACGGCTGTTTTTCTGCCTTGTTACCTTTATTCTGCTGGTCAATAGAAGGCCGAATccc > 2:4900842/1‑76 (MQ=37) tACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc < 1:1659114/76‑1 (MQ=255) aCGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcg < 2:4778678/76‑1 (MQ=255) gcgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgcg < 1:1975289/76‑1 (MQ=255) gcgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgcg < 1:6909048/76‑1 (MQ=255) gcgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCcgcg < 1:1752431/76‑1 (MQ=255) cgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc < 2:3603663/76‑1 (MQ=255) cgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc > 2:1167225/1‑76 (MQ=255) cgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc > 1:2275696/1‑76 (MQ=255) cgTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATACCgcgc > 2:6205919/1‑76 (MQ=255) gTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCa > 1:3352504/1‑76 (MQ=255) tCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAg > 2:4510255/1‑76 (MQ=255) tCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAg > 2:3516141/1‑76 (MQ=255) tCGCATCAGGCAACGGCTGGTTTTCGGCCTTGTTACCTTTATTCTGCTGCTTTAAAAAAGACAGACTTCCgcgccg > 2:6190038/1‑74 (MQ=255) cGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAgg < 2:1309712/76‑1 (MQ=255) cATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGat < 1:2857894/76‑1 (MQ=255) aTCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGata < 1:3621994/76‑1 (MQ=255) aTCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGata > 1:4682081/1‑76 (MQ=255) aTCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGata > 1:4738915/1‑76 (MQ=255) aTCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGata > 1:6118204/1‑76 (MQ=255) tCAGGCAACGGCTGGTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGCATCCCCCGCAGGatat > 2:7234557/1‑76 (MQ=255) cAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATAtt < 1:3145128/76‑1 (MQ=255) aGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTc < 2:4169058/76‑1 (MQ=255) ggCAACGGCTGTTATTCGGCCTTGTTACCTTTATTGTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCa > 1:693431/1‑76 (MQ=255) cAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAAc < 2:1605543/76‑1 (MQ=255) ggCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCt < 1:1105554/76‑1 (MQ=255) ggCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCt < 1:7285548/76‑1 (MQ=255) gCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTg > 2:6878554/1‑76 (MQ=255) gTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCt < 1:1004179/76‑1 (MQ=255) ttATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCtt > 2:6313437/1‑76 (MQ=255) ttATTCGGCCTTGTTACCTCTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCtt > 2:5093381/1‑76 (MQ=255) | GCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGGATATTCAACTCCTGGCTT > REL606/2583208‑2583357 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |