| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 2032155–2032209 | 2055473–2055409 | 23201–23319 | 115 [112] | [112] 114 | [manB]–[cpsG] | [manB],manC,insB‑14,insA‑14,wbbD,wbbC,wzy,wbbB,wbbA,vioB,vioA,wzx,rmlC,rfbA,rfbD,rfbB,galF,wcaM,wcaL,wcaK,wzxC,wcaJ,[cpsG] |
Only 100 of 115 total aligned reads displayed.
ATGCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGTGTTGTGTACT > REL606/2032079‑2032192 | aTGCCGATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGaa < 2:1125684/76‑1 (MQ=255)aTGCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGaa < 1:7637349/76‑1 (MQ=39)aTGCCCATATCCGCGACGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGaa < 2:2378662/76‑1 (MQ=255) tGCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAAt < 1:6353791/76‑1 (MQ=39) tGCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAAt < 1:797809/76‑1 (MQ=39) tGCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAAt > 2:2594199/1‑76 (MQ=39) tGCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAAt < 2:3906335/76‑1 (MQ=39) gCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATa < 2:5150171/76‑1 (MQ=39) gCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATa < 2:4868689/76‑1 (MQ=39) gCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATa < 1:1103130/76‑1 (MQ=39) gCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATa < 2:972802/76‑1 (MQ=39) gCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATa < 2:4148345/76‑1 (MQ=39) cccATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATAc > 1:3388877/1‑76 (MQ=39) cccATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATAc < 1:4056612/76‑1 (MQ=39) cATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCg > 1:4609273/1‑76 (MQ=255) atatCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTTGGAATACCGt > 2:4212960/1‑76 (MQ=255) atatCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGt > 2:2997486/1‑76 (MQ=255) atatCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGt > 1:7023743/1‑76 (MQ=255) atatCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGt > 1:1225043/1‑76 (MQ=255) atatCCGCGCCGGGTTTGATGACCGCATTACGGGAGTCGTCGCGGCATTCCGGCAGCAACAGGATAGGAATACCGt > 2:886241/1‑76 (MQ=14) tatCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGtt > 2:6878591/1‑76 (MQ=255) tatCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGtt > 2:3961396/1‑76 (MQ=255) tatCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGtt > 2:5043018/1‑76 (MQ=255) atCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTg > 2:4245304/1‑76 (MQ=255) atCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTg > 2:5768329/1‑76 (MQ=255) tCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTgg < 2:2629399/76‑1 (MQ=255) tCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTgg < 1:5694869/76‑1 (MQ=255) tCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTgg < 2:3916746/76‑1 (MQ=255) tCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTgg < 2:4505557/76‑1 (MQ=255) ccGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTggg < 2:442828/76‑1 (MQ=255) cgcgCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTgggg > 1:693456/1‑76 (MQ=255) cgcgCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTgggg < 1:1035844/76‑1 (MQ=255) cgcgCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGGTAGGAATACCGTTgggg > 2:564508/1‑76 (MQ=255) gcgcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGa < 1:4835241/76‑1 (MQ=255) gcgcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGa < 1:7477719/76‑1 (MQ=255) cgcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGaa < 2:4207484/76‑1 (MQ=255) cgcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGaa < 2:7526875/76‑1 (MQ=255) cgcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGaa > 1:1052613/1‑76 (MQ=255) cgcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGaa < 1:3869512/76‑1 (MQ=255) cgcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGaa < 1:2475001/76‑1 (MQ=255) gcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGaaa > 2:7615448/1‑76 (MQ=255) gcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGaaa > 1:7580006/1‑76 (MQ=255) gcCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGaaa < 1:7497873/76‑1 (MQ=255) ccGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAt > 2:6469066/1‑76 (MQ=255) ccGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAt > 1:5847478/1‑76 (MQ=255) ccGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAt > 1:2540279/1‑76 (MQ=255) ccGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAt > 1:642268/1‑76 (MQ=255) ccGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAt > 1:124176/1‑76 (MQ=255) cGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAtt > 2:5802065/1‑76 (MQ=255) cGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAtt > 1:4318199/1‑76 (MQ=255) cGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAtt < 2:6760462/76‑1 (MQ=255) cGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAtt < 2:6887709/76‑1 (MQ=255) cGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAtt < 1:5153920/76‑1 (MQ=255) cGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAtt < 1:2336203/76‑1 (MQ=255) gtgtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTg < 1:3909767/76‑1 (MQ=255) gtgtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTg < 1:4199064/76‑1 (MQ=255) gtgtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTg < 1:4271234/76‑1 (MQ=255) gtgtTTGAGGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTg < 2:1808677/76‑1 (MQ=255) tgtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGc > 1:6217881/1‑76 (MQ=255) tgtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAATGc > 1:5171699/1‑76 (MQ=255) gtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGGAACGGGATAGGAATACCGTTGGGGAAATTGcc > 2:6148954/1‑76 (MQ=255) gtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGcc < 1:5984584/76‑1 (MQ=255) gtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGcc < 2:7387929/76‑1 (MQ=255) gtTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGcc < 1:3997747/76‑1 (MQ=255) tttGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCg < 2:2916958/76‑1 (MQ=39) tttGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCg > 1:6362211/1‑76 (MQ=39) tttGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCg > 1:4611672/1‑76 (MQ=39) tttGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCg > 1:2592932/1‑76 (MQ=39) tttGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCg > 2:2971402/1‑76 (MQ=39) ttGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAACTTGCCGt > 2:1551439/1‑76 (MQ=255) ttGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGt > 1:5811898/1‑76 (MQ=39) tgatgaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCggc > 1:6953225/1‑74 (MQ=255) tgatgaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTc < 1:2904204/76‑1 (MQ=39) gatgaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTcc < 2:3271735/76‑1 (MQ=39) atgaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCg > 1:4138517/1‑76 (MQ=39) atgaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCg < 1:2623399/76‑1 (MQ=39) atgaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCg < 1:6909019/76‑1 (MQ=39) atgaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCCTCCg > 2:390093/1‑76 (MQ=255) atgaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAAATGCCGTCCg > 2:5137809/1‑76 (MQ=255) gaCCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGc > 2:7514942/1‑76 (MQ=39) ccGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCgt < 2:6622403/76‑1 (MQ=39) ccGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCgt < 1:5920806/76‑1 (MQ=39) cGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTTCGGCgtg > 2:6719892/1‑76 (MQ=255) cGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCgtg < 1:525412/76‑1 (MQ=39) cGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCgtg < 2:6107352/76‑1 (MQ=39) cATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGtgtt > 1:6038803/1‑76 (MQ=39) aTTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGtgttg < 2:5997695/76‑1 (MQ=39) aTTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGtgttg > 2:682164/1‑76 (MQ=39) aTTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGtgttg > 1:4689478/1‑76 (MQ=39) aTTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGtgttg > 1:1851432/1‑76 (MQ=39) ttACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGCATACCGTTGGGGAAATTGGCGTCCGGCGtgttgt > 1:5282892/1‑76 (MQ=255) ttACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGtgttgt < 2:5272086/76‑1 (MQ=39) ttACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGtgttgt < 2:3403572/76‑1 (MQ=39) ttACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGATAGGAATACCGTTGGGGAAATTGCCGTCCGGCGtgttgt > 2:7096025/1‑76 (MQ=255) tACGGGGGTCGGCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGTGTtgtg < 1:5952218/76‑1 (MQ=255) aCGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGTGTtgtgc < 1:4384640/76‑2 (MQ=21) aCGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGTGTtgtgc > 1:525292/1‑75 (MQ=21) aCGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGTGTtgtgc > 1:5352550/1‑75 (MQ=21) cGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGTGTtgtgca < 1:7598223/76‑3 (MQ=14) ggTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGTGTTGTGGACt > 1:1130072/1‑76 (MQ=21) | ATGCCCATATCCGCGCCGTGTTTGATGACCGCATTACGGGTGTCGTCGCGGCATTCCGGCAGCAACGGGTTAGGAATACCGTTGGGGAAATTGCCGTCCGGCGTGTTGTGTACT > REL606/2032079‑2032192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |