| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 573170 = | 141 (0.550) | 7 (0.030) +CCTTCCGTATCTT |
6/124 | 16.5 | 5.7% | coding (319/1599 nt) | ECB_00530 | conserved hypothetical protein |
| ? | REL606 | = 573174 | 141 (0.550) | coding (315/1599 nt) | ECB_00530 | conserved hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 141 total aligned reads displayed.
GTCACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTACAGCAT > REL606/573100‑573224 | gTCACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGgc < 2:2109707/76‑1 (MQ=31) cACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGgcgc > 2:5303347/1‑76 (MQ=34) cACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGgcgc > 2:1707264/1‑76 (MQ=34) cACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGgcgc > 2:8023419/1‑76 (MQ=34) cACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGgcgc < 2:3648512/76‑1 (MQ=34) cACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGgcgc < 2:7168814/76‑1 (MQ=34) cACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGgcgc > 2:7507030/1‑76 (MQ=34) aCCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCa < 2:4721587/76‑1 (MQ=35) aCCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCa > 2:5737993/1‑76 (MQ=35) aCCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCa < 1:2283267/76‑1 (MQ=35) aCCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCa < 2:4076545/76‑1 (MQ=35) ccccGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAg < 1:7857171/76‑1 (MQ=38) ccccGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAg < 1:2413229/76‑1 (MQ=38) ccccGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAg > 2:140324/1‑76 (MQ=38) cccGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGa < 1:637522/76‑1 (MQ=39) ccGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGAc < 1:3424529/76‑1 (MQ=40) ccGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGAc > 2:3816717/1‑76 (MQ=40) ccGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGAc < 2:2611654/76‑1 (MQ=40) ccGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGAc < 2:2430754/76‑1 (MQ=40) gTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCg > 1:3590468/1‑76 (MQ=255) gTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCg > 1:2773651/1‑76 (MQ=255) ttttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCgg < 2:7528013/76‑1 (MQ=255) ttttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCgg > 1:433134/1‑76 (MQ=255) ttttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCgg > 2:8036485/1‑76 (MQ=255) ttttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCgg > 2:3624804/1‑76 (MQ=255) tttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGc > 2:3800206/1‑76 (MQ=255) tttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGc > 1:1013606/1‑76 (MQ=255) tttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGc < 1:6223472/76‑1 (MQ=255) ttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCa < 2:333143/76‑1 (MQ=255) ttCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCa > 2:8127742/1‑76 (MQ=255) tCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTTTGGCGTAGACCGGGAc > 2:7774025/1‑76 (MQ=14) tCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCAc < 1:6456773/76‑1 (MQ=255) tCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCAc < 2:2187302/76‑1 (MQ=255) tCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCAc > 1:3832370/1‑76 (MQ=255) tCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCAc > 2:1261627/1‑76 (MQ=255) tCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCAc < 2:5608831/76‑1 (MQ=255) tCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCAc < 1:5734482/76‑1 (MQ=255) ccTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACg > 2:5774186/1‑76 (MQ=255) ccTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACg > 1:4722411/1‑76 (MQ=255) ccTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACg < 1:5937784/76‑1 (MQ=255) ccTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACg < 1:7435841/76‑1 (MQ=255) ccTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACg < 2:5412373/76‑1 (MQ=255) cTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCCGGCCGGCACGc > 2:5683421/1‑76 (MQ=255) cTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGc > 1:3371699/1‑76 (MQ=255) cTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGc > 1:1168424/1‑76 (MQ=255) tGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGcc > 1:7185026/1‑76 (MQ=255) gCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCca > 2:5172883/1‑76 (MQ=255) cAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCcac < 2:3809148/76‑1 (MQ=255) cAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCcac < 1:1077539/76‑1 (MQ=255) cAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCcac > 2:5059262/1‑76 (MQ=255) aaCATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCcaca < 1:1730126/76‑1 (MQ=255) aCATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAg > 2:8361592/1‑76 (MQ=255) aCATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAg > 1:5725027/1‑76 (MQ=255) cATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAgc > 2:6133356/1‑76 (MQ=255) tCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAgcgg < 2:2031348/76‑1 (MQ=255) tCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAgcgg < 2:8172081/76‑1 (MQ=255) cGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAgcggc < 2:7606508/76‑1 (MQ=255) cGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAgcggc > 2:6992424/1‑76 (MQ=255) cGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAgcggc > 2:6696868/1‑76 (MQ=255) gTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAgcggcg > 1:926332/1‑76 (MQ=255) gCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCggg < 2:1640768/76‑1 (MQ=255) gCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCggg > 1:6776085/1‑76 (MQ=255) gCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCggg < 2:144991/76‑1 (MQ=255) gCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCggg > 2:6957727/1‑76 (MQ=255) ccGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGt < 2:3568286/76‑1 (MQ=255) cGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCggggg > 2:2419173/1‑74 (MQ=255) cGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTg < 2:7742088/76‑1 (MQ=255) gAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCgggggg > 2:1697854/1‑73 (MQ=255) gAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGc < 2:4190983/76‑1 (MQ=255) aGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGGGcg > 1:7769761/1‑75 (MQ=255) ggATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCAc < 1:5281591/76‑1 (MQ=255) ggATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCAc < 2:2787975/76‑1 (MQ=255) gATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCAcc < 2:2655790/76‑1 (MQ=255) aTGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCt < 2:7510998/76‑1 (MQ=255) aTGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCt < 2:7211482/76‑1 (MQ=255) gCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTc < 2:8354255/76‑1 (MQ=255) gCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTc < 1:1746322/76‑1 (MQ=255) ttttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCAt < 2:1809881/76‑1 (MQ=255) ttttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCAt < 2:4315008/76‑1 (MQ=255) ttttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCAt < 2:6189155/76‑1 (MQ=255) ttttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCAt < 1:3937670/76‑1 (MQ=255) ttttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCAt < 2:1729129/76‑1 (MQ=255) ttttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGGGGCCCTTCac > 2:4032651/1‑75 (MQ=17) tttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATg < 2:5338031/76‑1 (MQ=255) tttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATg < 1:2106447/76‑1 (MQ=255) tttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATg < 1:40380/76‑1 (MQ=255) ttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGc < 1:4557197/76‑1 (MQ=255) ttGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGc < 1:7572289/76‑1 (MQ=255) aTGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGt < 1:1173543/76‑1 (MQ=255) tGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTa < 2:6662239/76‑1 (MQ=40) tGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTa < 2:6658269/76‑1 (MQ=40) tGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTa < 1:7953396/76‑1 (MQ=40) gTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTAc < 1:2873186/76‑1 (MQ=39) gTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGGGCAGCTTCAAGCTTTAc > 2:1144838/1‑76 (MQ=14) tCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTACa < 2:1699959/76‑1 (MQ=38) tCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTACa < 1:4971861/76‑1 (MQ=38) ccTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTACAg < 2:5810660/76‑1 (MQ=35) ccTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTACAg < 2:1028618/76‑1 (MQ=35) cTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTACAGc < 1:8210769/76‑1 (MQ=34) tCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGGGGGCCCTCCTGCTGTgcagca > 1:1048491/1‑76 (MQ=11) | GTCACCCCGTTTTCCTGCAACATCGTGCCGAGGATGCTTTTGATGTCCTCGTTCTGGAAGATACGGAAGTTCTGGCGCAGACCGGCACGCCACAGCGGCGGGTGCACCTTCATGCTGTACAGCAT > REL606/573100‑573224 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |