| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 239,163 | 0 | T | G | 34.1% | 410.5 / 128.9 | 211 | V58G (GTG→GGG) | dnaQ | DNA polymerase III subunit epsilon |
| Reads supporting (aligned to +/- strand): ref base T (3/136); new base G (72/0); total (75/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 263 total aligned reads displayed.
TTGGTGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAGTAGC > REL606/239088‑239238 | ttGGTGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCt‑ggt < 2:2750956/76‑1 (MQ=255)ttGGTGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCt‑ggt < 2:74373/76‑1 (MQ=255) ggTGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCt‑ggtgg < 1:303066/76‑1 (MQ=255) ggTGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCt‑ggggg > 1:3206209/1‑76 (MQ=255) tGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGAt < 1:4772895/76‑1 (MQ=255) gCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCt‑gggggggc > 1:1938837/1‑73 (MQ=255) ccGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATcc < 2:3910620/76‑1 (MQ=255) cGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑g > 2:252923/1‑76 (MQ=255) cGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑g > 2:4861283/1‑76 (MQ=255) gTTGAAGTGGTGACCCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑gg < 1:519404/76‑1 (MQ=255) gTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑gg < 1:7012793/76‑1 (MQ=255) gTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑gg < 1:3655477/76‑1 (MQ=255) tGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGaa < 1:6027122/76‑1 (MQ=255) gAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTGC‑GGAA‑g > 2:8107592/1‑76 (MQ=255) aggggtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑cc < 1:7069556/73‑1 (MQ=255) gtggtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑t < 2:7899045/76‑1 (MQ=255) tggtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑tt < 1:2765233/76‑1 (MQ=255) ggtgACCCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAACCCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑ttt < 2:1790728/76‑1 (MQ=255) ggtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCT‑GGAA‑G‑CC‑ttt < 1:5408003/76‑1 (MQ=255) ggtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑ttt < 1:6278274/76‑1 (MQ=255) ggtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑ttt < 1:5685328/76‑1 (MQ=255) ggtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑ttt < 1:7701831/76‑1 (MQ=255) ggtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑ttt < 1:5573354/76‑1 (MQ=255) gtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTg < 2:3091033/76‑1 (MQ=255) gtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTg < 2:3335872/76‑1 (MQ=255) gtgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTg < 2:3701852/76‑1 (MQ=255) tgACCCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTgg < 2:4798810/76‑1 (MQ=255) tgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTgg < 2:6077034/76‑1 (MQ=255) tgAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTGC‑CGAA‑G‑CC‑TTTgg > 2:1545091/1‑76 (MQ=255) gAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGc < 1:3837867/76‑1 (MQ=255) aaCCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAAGG‑CC‑TTTgcg > 2:4715159/1‑74 (MQ=255) aCCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGt < 2:7996707/76‑1 (MQ=255) aCCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGt < 1:6422783/76‑1 (MQ=255) cGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTAc < 2:1152429/76‑1 (MQ=255) cGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGATCC‑GGAA‑G‑AC‑TTTTGGGTAc > 2:3564130/1‑76 (MQ=255) tCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACAt < 2:1610938/76‑1 (MQ=255) gCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑TTTGGCGTACATgg > 2:7152252/1‑76 (MQ=255) ccggACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGt < 2:6549429/73‑1 (MQ=255) ccTGACGGGCAATAACTTCCATGTTTATCTCAACCCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGt < 1:7907887/76‑1 (MQ=255) cTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTa < 2:2321803/76‑1 (MQ=255) cTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGATCC‑GGGA‑G‑CC‑TTTGGCGTGCATGGTa > 2:6041176/1‑76 (MQ=255) gACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑tt < 2:6673055/76‑1 (MQ=255) aCGGGCAATATCTTCATTGTTTATCTCAATCCCGAGCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTg < 2:7081810/76‑1 (MQ=255) aCGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTg < 1:6805244/76‑1 (MQ=255) aCGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTg < 2:5249085/76‑1 (MQ=255) cGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑CTTTGCGTGCATGGGA‑tttc > 2:4350824/1‑74 (MQ=255) gCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGGA‑G‑CA‑CTTGGGGGACATGGTA‑TTGCCGa > 1:6200176/1‑76 (MQ=255) cAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCCGGGAG‑G‑CC‑TTTGG‑GTTCATGGGA‑TTTCCGAt > 2:70237/1‑76 (MQ=255) aTAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGa < 2:6491684/76‑1 (MQ=255) aaCTTCCATGTTTATCTCAAACCCGATCGGCTGGGGGGGGCG‑GGAG‑G‑CC‑TTTGGGGCAC‑TGGGA‑TTGCCCATGGAt > 1:2402341/1‑76 (MQ=255) aaCTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAAGG‑CC‑TTTGG‑GGACACGGGA‑TTGCCGATGAAt > 2:3293487/1‑76 (MQ=255) aaCTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑GC‑TTTTGCGTCCATGGGA‑TTTGCGATGAAt > 1:924650/1‑76 (MQ=255) aaCTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑TTTGGGGTACATGGGA‑TTGCCGAAGAAt > 1:435409/1‑76 (MQ=255) aaCTTCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGATCC‑GGAA‑GACC‑TTTGG‑GGACATGGGA‑TTTCCGCTGAAt > 2:839217/1‑76 (MQ=255) cTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAAttt < 2:6478580/76‑1 (MQ=255) ttCCATGTTTATCTCAAACCCGATCGGCT‑GGGGGAGGC‑GGAA‑G‑CC‑CTTGGCGCCCATCGTG‑TTGCCGATGAAtttt > 2:2773978/1‑76 (MQ=255) tCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAAttttt < 1:2940767/76‑1 (MQ=255) ccATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTg < 2:3177907/76‑1 (MQ=255) ccATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑TTTTGCGTACATGGTG‑TTGTCGATGAActtttt > 2:2066392/1‑75 (MQ=255) ccATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑CTTTGCGGCCATTGGA‑TTGCCCGTGGAtttttt > 1:162457/1‑75 (MQ=255) ccATGTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑CGAA‑G‑GC‑CTTGGCGTTCCCTGGA‑ATGCCGATAGAtttttt > 2:771174/1‑75 (MQ=255) tGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑c < 1:1003175/76‑1 (MQ=255) tGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑c < 2:7491987/76‑1 (MQ=255) gTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑Cg < 2:3475254/76‑1 (MQ=255) gTTTATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑TTTGGCGGACATGGGA‑TTTGCGATGAATTTTTTCT‑Cg > 1:2485602/1‑76 (MQ=255) ttATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGGA‑G‑CC‑TTTTGCGGACATGGTA‑TTGGCGATGAATTTTTTTT‑CGAt > 2:5790737/1‑76 (MQ=255) ttATCTCAAACCCGATCGGCT‑GGGGGGTCC‑GGGA‑G‑CC‑TTTTGCGGACATGGTA‑TTGCCGCTGAATTTTTTTT‑CGAt > 1:4058047/1‑76 (MQ=255) aTCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATaa < 2:5487434/76‑1 (MQ=255) aTCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATaa < 1:1182347/76‑1 (MQ=255) aTCTCAAACCCGATCGGCT‑GGGGGATCC‑GGAA‑G‑CC‑CTTGGCGTACATGGGA‑TTTCCGATGAAATTTTTTT‑CGTTaa > 1:3108912/1‑76 (MQ=255) tctcAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAg < 1:7868328/76‑1 (MQ=255) tctcAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAg < 1:7989500/76‑1 (MQ=255) tctcAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑TTTGGCGGACATGGGA‑TTTCCGATGAATTTTTGCT‑CGATCAg > 1:5334806/1‑76 (MQ=255) ctcAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑CTTGGCGTACATGGTA‑TTGCCGATGAATTTTTTCT‑CGGTAAGc > 1:2279014/1‑76 (MQ=255) ctcAAACCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑CTTGGCGTACATGGGA‑TTGCCGATGAATTTTTTTT‑CGATaaac > 2:2416822/1‑74 (MQ=255) tcAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGcc < 1:3325900/76‑1 (MQ=255) cAAACCCGATCGGCT‑GGGGGATCC‑GGGA‑G‑CC‑CTTGGGGGTCATGGTA‑TTTGCCATGAATTTTTGCT‑TGATAAGtcc > 2:6152810/1‑76 (MQ=255) cAAACCCGATCGGCT‑GGGGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTTCT‑CGATAAGccc > 1:1773667/1‑76 (MQ=255) aaaCCCGATCGGCTGGGGGGATCC‑GGAG‑C‑CC‑TTTGGGGAACA‑GGGA‑TTGCCGAAGAAATTTTTCTCCAATAAGccc > 2:4811310/1‑76 (MQ=255) aaaCCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCa < 1:1060569/76‑1 (MQ=255) aaCCCGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CCTTTTGGCG‑ACATGGGAGTTGCC‑ATGAACTTTTTTG‑CGCTAAGCCCAc > 2:4595249/1‑76 (MQ=255) cccGATCGGCT‑GGGGGGTCC‑GGAA‑G‑CC‑TTTGGCGTACATGGGA‑TTGCCGAAGAATTTTTTCT‑CGATTAGGCCAcct > 1:5953957/1‑74 (MQ=255) ccGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGtt < 1:5074390/76‑1 (MQ=255) ccGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGtt < 2:6275938/76‑1 (MQ=255) ccGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGtt < 2:1967690/76‑1 (MQ=255) ccGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGtt < 2:1366136/76‑1 (MQ=255) ccGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGtt < 1:8027779/76‑1 (MQ=255) gATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTg < 2:5393475/76‑1 (MQ=255) aTCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGc < 1:5840204/76‑1 (MQ=255) cGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGGTGAATTTTTGCT‑CGATAAGCCCACGTTTGCCg < 2:4041275/76‑1 (MQ=255) cGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCg < 1:7302372/76‑1 (MQ=255) gCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTGCATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGaa < 1:4670562/76‑1 (MQ=255) gCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGaa > 1:4222821/1‑76 (MQ=255) cT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAg < 1:655644/76‑1 (MQ=255) t‑ggtggATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAga > 2:2898744/1‑75 (MQ=255) t‑ggtggATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAGt < 1:7491658/76‑1 (MQ=255) t‑ggtggATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAGt < 2:132059/76‑1 (MQ=255) ggtggATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAGTa > 1:1491701/1‑76 (MQ=255) tggATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAGTAGc < 1:7140793/76‑1 (MQ=255) tggATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAGTAGc > 2:7586636/1‑76 (MQ=255) | TTGGTGCCGTTGAAGTGGTGAACCGTCGCCTGACGGGCAATAACTTCCATGTTTATCTCAAACCCGATCGGCT‑GGTGGATCC‑GGAA‑G‑CC‑TTTGGCGTACATGGTA‑TTGCCGATGAATTTTTGCT‑CGATAAGCCCACGTTTGCCGAAGTAGC > REL606/239088‑239238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |