| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 717648 | 203 (0.870) | 6 (0.030) | 5/136 | 19.4 | 3.1% | intergenic (+263/‑70) | ECB_00664/yhhI | hypothetical protein/predicted transposase; b3484_1 |
| ? | REL606 | = 1506442 | 188 (0.890) | coding (65/792 nt) | ydcC | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 214 total aligned reads displayed.
AGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTGGGAAGATAT > REL606/1506367‑1506517 | aGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGt < 1:1695824/76‑1 (MQ=34)aGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGt > 2:1676710/1‑76 (MQ=34) gagaACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTgg < 2:3301131/76‑1 (MQ=34) gagaACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTgg > 2:5923705/1‑76 (MQ=34) gagaAAAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTgg < 2:824783/76‑1 (MQ=21) agaACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGa < 1:6940657/76‑1 (MQ=34) gaACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGaa < 2:490267/76‑1 (MQ=34) aaCAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAat > 1:1841854/1‑76 (MQ=35) aaCAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTACCCCCGATTACAGACAAGCCTGGAAAGTGGAat < 1:4859932/76‑1 (MQ=255) aCAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAata < 1:1037826/76‑1 (MQ=38) aCAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAata < 2:2993407/76‑1 (MQ=38) aCAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAata < 1:5662783/76‑1 (MQ=38) cAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAatat > 1:2323636/1‑76 (MQ=39) cAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAatat < 2:5053014/76‑1 (MQ=39) cAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAatat < 1:3576781/76‑1 (MQ=39) aaaaTGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAAtata < 1:6818923/76‑1 (MQ=39) aaaaTGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAAtata > 1:3001671/1‑76 (MQ=39) aaTGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAatatctc < 2:58451/76‑4 (MQ=255) ggAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTa > 1:4251979/1‑76 (MQ=40) ggAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTa > 1:5831676/1‑76 (MQ=40) aaCTTAAAAAAATAATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATc < 1:3420086/76‑1 (MQ=255) aCTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTAtag < 1:6112924/76‑3 (MQ=255) tAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGat < 1:4425810/76‑1 (MQ=255) aaaTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCt < 1:3756948/76‑1 (MQ=255) aaaTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCt > 1:4899339/1‑76 (MQ=255) aaTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTa > 2:3570526/1‑76 (MQ=255) aaTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTa > 1:1568444/1‑76 (MQ=255) aaTGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTa < 2:2061434/76‑1 (MQ=255) tgatgGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACt > 1:2238119/1‑76 (MQ=39) gatgGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTg < 2:4169196/76‑1 (MQ=39) gatgGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTg < 1:3386795/76‑1 (MQ=39) aatgGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTg < 1:3752309/75‑1 (MQ=39) atgGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGt > 2:5614747/1‑76 (MQ=39) tgGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGtt > 2:5447656/1‑76 (MQ=39) tgGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGtt > 1:3930190/1‑76 (MQ=39) ggAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTg > 1:2845220/1‑76 (MQ=39) ggAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTg < 1:7237893/76‑1 (MQ=39) aCATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACt < 1:7293046/76‑1 (MQ=39) cATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTa < 1:2911640/76‑1 (MQ=255) cATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTa > 2:6119563/1‑76 (MQ=255) cATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTa < 2:7318117/76‑1 (MQ=255) atatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTAt > 2:890730/1‑76 (MQ=39) atatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTAt < 1:2470887/76‑1 (MQ=39) tatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTAtt > 1:1104304/1‑76 (MQ=39) tatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTAtt < 1:1928311/76‑1 (MQ=39) tatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTAtt > 2:5236607/1‑76 (MQ=39) tatTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTAtt > 1:5638533/1‑76 (MQ=39) tttCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTtg > 2:1249521/1‑76 (MQ=39) ttCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTtgt > 1:7126666/1‑76 (MQ=39) ttCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTtgt > 2:6691088/1‑76 (MQ=39) ttCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTtgt > 1:1472228/1‑76 (MQ=39) tCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTtgtg > 2:5711999/1‑76 (MQ=39) cTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGc > 2:6649523/1‑76 (MQ=39) tattatCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGcc > 2:1128726/1‑76 (MQ=39) tttatCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCg < 1:1300550/75‑1 (MQ=39) attatCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCg > 1:1895526/1‑76 (MQ=39) ttatCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGt > 1:162981/1‑76 (MQ=39) ttatCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGt > 2:7486558/1‑76 (MQ=39) ttatCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGt > 1:100296/1‑76 (MQ=39) tttcccGATTGCAGACAAGCCTGGTAAGTGGCATATGAATTATCGGATATTCTACTGTTGACTACTTGAGCCGTTa > 2:426988/4‑76 (MQ=14) atCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTa > 2:768340/1‑76 (MQ=39) acccccGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTa < 1:2556902/74‑1 (MQ=255) ccccGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTAtt > 1:797005/1‑76 (MQ=39) ccccGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTAtt < 2:5540642/76‑1 (MQ=39) ccccGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTAtt < 2:641164/76‑1 (MQ=39) cccGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTAttt < 1:6859193/76‑1 (MQ=39) cccGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTAttt < 2:410139/76‑1 (MQ=39) ccGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTc > 2:2116482/1‑76 (MQ=39) cGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCt < 1:6437961/76‑1 (MQ=39) cGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCt > 1:7436363/1‑76 (MQ=39) aTTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTgg > 2:6501037/1‑76 (MQ=39) ttACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGt > 1:411452/1‑76 (MQ=39) ttACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGt > 1:3123667/1‑76 (MQ=39) tACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTg < 1:6893069/76‑1 (MQ=39) tACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTg > 2:4066515/1‑76 (MQ=39) tACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTg < 1:5182367/76‑1 (MQ=39) tACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTg > 2:2102361/1‑76 (MQ=39) aCAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGc < 1:6341084/76‑1 (MQ=39) cAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCg > 1:3065013/1‑76 (MQ=40) cAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCg > 2:1623512/1‑76 (MQ=40) aaaCAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCgg < 2:3029865/74‑1 (MQ=255) aGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCgg < 2:2345880/76‑1 (MQ=255) aGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCgg > 2:7090183/1‑76 (MQ=255) aCAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGaa < 2:2834167/76‑1 (MQ=255) aaGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAgg > 1:778483/1‑76 (MQ=255) aaGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAgg > 2:6968661/1‑76 (MQ=255) ccTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTg < 2:3545570/76‑1 (MQ=39) ccTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTg < 2:558616/76‑1 (MQ=39) ccTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTg > 1:918405/1‑76 (MQ=39) ccTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTg < 1:332689/76‑1 (MQ=39) cTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTgg > 1:5251579/1‑76 (MQ=39) cTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTgg > 1:5418859/1‑76 (MQ=39) cTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTgg < 2:3945765/76‑1 (MQ=39) cTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGGTgg > 2:192037/1‑76 (MQ=255) tGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTggg < 2:6342148/76‑1 (MQ=40) tGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTggg < 1:4153597/76‑1 (MQ=39) gAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTGGGaa < 1:5776981/76‑1 (MQ=39) aaGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTGGGAAGa > 1:6509460/1‑76 (MQ=39) tGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTGGGAAGatat < 1:4570725/76‑1 (MQ=39) tGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTGGGAAGatat < 1:6706962/76‑1 (MQ=39) | AGGAGAACAAAATGGAACTTAAAAAAATGATGGAACATATTTCTATTATCCCCGATTACAGACAAGCCTGGAAAGTGGAATATAAATTATCGGATATTCTACTGTTGACTATTTGTGCCGTTATTTCTGGTGCGGAAGGTTGGGAAGATAT > REL606/1506367‑1506517 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |