| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 20119 | 186 (0.860) | 3 (0.020) | 3/134 | 21.3 | 2.1% | coding (499/960 nt) | ECB_00020 | hypothetical protein |
| ? | REL606 | = 20289 | 118 (0.610) | coding (329/960 nt) | ECB_00020 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACAAATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTATAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/20037‑20119‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttataattTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAACACC < REL606/20289‑20216 ACAAATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAAT < 2:887160/76‑1ACAAATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAAT > 2:4518003/1‑76ACAAATCGTCCAGTGTCGATGGATTGACTTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAAT > 2:6446913/1‑76 CAAATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATT < 2:4061888/76‑1 AAATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTA < 2:3832561/76‑1 AATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTAT < 1:3201472/76‑1 AATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTAT < 2:657288/76‑1 AATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTAT < 1:5694260/76‑1 ATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTATA > 2:742653/1‑76 TCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTATAA < 2:5663180/76‑1 TCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTATAA < 2:3602291/76‑1 CGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTATAAT < 2:5193869/76‑1 TCATTAAATTTACCTGTAAAATAGTATTTAAATTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTC > 2:3227085/1‑76 ACCTGTAAAATAGTATTTAAATTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATC > 2:5389854/1‑76 TTTAAATTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGAT > 2:4170139/1‑76 TTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCT < 1:5002634/76‑1 TTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCT > 1:2185132/1‑76 TTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCT < 1:3971259/76‑1 TTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCT < 1:5758327/76‑1 TTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCT < 2:3481565/76‑1 TTATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCT > 2:2500174/1‑76 TATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTA > 1:4796161/1‑76 TATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTA > 2:2418349/1‑76 TATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTA < 2:2329631/76‑1 TATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTA > 2:5942910/1‑76 ATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAA < 2:3594346/76‑1 ATAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAA > 2:1490870/1‑76 TAATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAAC > 1:6265611/1‑76 AATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAACA < 2:5484209/76‑1 AATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAACA > 1:4793926/1‑76 AATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAACA < 1:6509939/76‑1 ATTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAACAC < 1:6622246/76‑1 TTTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAACACC > 2:65762/1‑76 ACAAATCGTCCAGTGTCGATGGATTGATCTTCAAAACCACAGGTCATTAAATTTACCTGTAAAATAGTATTTAAATTATAATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/20037‑20119‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttataattTAGAAGAAATGCTATCTGCGATAAATTTCACCATTCCATATTCTATCGCATCTGTATCAGATAGTTCTAACACC < REL606/20289‑20216 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |