| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 2103887 | 3 (0.020) | 71 (0.350) +CAGC |
26/80 | 4.7 | 90.8% | coding (154/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | 2103888 = | 10 (0.050) | coding (155/216 nt) | ECB_01992 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 111 total aligned reads displayed.
AAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2103813‑2103887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTAT > REL606/2103888‑2103962 |||||| AAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑C < 2:2718599/76‑1AAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑C < 2:3381042/76‑1 ACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG < 1:6917034/76‑1 ACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG < 1:5022721/76‑1 CATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑C > 1:3802172/1‑76 ATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CC > 1:1056300/1‑76 ATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CC < 2:1101023/76‑1 ATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CC < 2:3122877/76‑1 ATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CC < 1:4039942/76‑1 TGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCA < 2:1400059/76‑1 TGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCA < 1:617958/76‑1 GGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAG < 2:2936289/76‑1 GGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAG < 2:917750/76‑1 GGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAG < 1:1290092/76‑1 GGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAG > 1:3063613/1‑76 GCTATACAATGAAAACTCCTTCGTTATTGACTTCGAATATAAAGGGGAGAAA‑TTTGCATTAGATTTCA‑CAG‑CGAGC > 2:6173700/1‑76 CTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCC < 2:6606421/76‑1 CTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCC < 1:3759868/76‑1 TATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCA > 2:4780293/1‑76 TATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCA < 1:445194/76‑1 TATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCA < 1:2491446/76‑1 ATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAG > 1:238628/1‑76 ATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAG > 1:5076532/1‑76 ATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAG < 2:2840041/76‑1 ACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCC < 1:4189634/76‑1 CAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCA > 1:4254286/1‑76 CAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCA > 1:4696485/1‑76 CAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCA > 2:939647/1‑76 CAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCA < 1:5580590/76‑1 AATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAG > 1:2926125/1‑76 AATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAG > 2:5715158/1‑76 AATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAG < 1:5282305/76‑1 AATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAG > 1:5408036/1‑76 TGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCC > 1:2143203/1‑76 GAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCA > 2:6701680/1‑76 AAAACTGTTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGTTTTCA‑CAG‑CCAGCCAGCCAGCCAG < 2:423213/76‑1 AAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAG > 1:3053637/1‑76 AAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAG > 2:1451935/1‑76 AAAACTGCTCCGTTATTGACTTCGAATATAAAGGGGTAAAA‑TTTGCATTAGATTCCA‑CGG‑CCAGCCACCCAGCCAG < 2:2828223/76‑1 AAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGC > 2:4765320/1‑76 AACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCC > 1:4260983/1‑76 ACTGTTTCGTTATTGACTTCGAATA‑AAAGGGGGGAAATTTTGCATTAGTTTTCA‑CAG‑CCAGCCAGCCAGCCAGCCA < 2:364799/76‑1 CTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAG > 1:333838/1‑76 TGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGC > 1:1623954/1‑76 GCTTGGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTGGCATTAAATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCC < 1:1348915/76‑1 CTTCGTTATTGACTTCGAATAAAAGGGGGTAAAA‑TTTGCATTAGTTTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCA < 1:5670972/76‑1 TTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAG > 1:3566386/1‑76 TTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAG > 2:2043067/1‑76 TCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGC > 2:2574522/1‑76 CGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCC > 1:3841428/1‑76 CGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCC > 2:5519026/1‑76 CGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCC > 2:5540316/1‑76 GTTATTGATTTCAAATAAAAAGGGGTAAAT‑TTTGCATAAGATTTCC‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCA < 1:1129191/76‑1 GTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCA > 1:5168522/1‑76 GTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCA > 2:2931957/1‑76 TTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAG > 1:3327344/1‑76 TATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGGCAGCCAGC > 2:5509259/1‑76 TTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCA > 1:2537690/1‑76 TTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCA > 1:2618109/1‑76 TGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAG > 2:5686862/1‑76 GACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGG > 1:6269749/1‑76 CGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGA > 1:2450341/1‑76 GAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAA > 2:4644272/1‑76 GAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAA > 1:6203754/1‑76 GAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAA > 2:5112932/1‑76 ATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATG > 1:6010091/1‑76 ATATAAAGGGGGGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATG > 2:10612/1‑76 TATAAAGGGGCGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGT > 1:5787538/1‑76 ATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTG > 1:3458718/1‑76 ATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTG > 1:2237010/1‑76 TAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGG > 1:5397864/1‑76 AAAGGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCGAGCCAGCCAGCCAGCCAGCCAGCCAGGAGTGAATGTGGA > 2:5565193/1‑76 GGGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTT > 1:5852431/1‑76 GGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTT > 2:2439951/1‑76 GGGTGAAA‑TTTGCATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTT > 1:1606351/1‑76 TTTGCATTAGATTTCA‑CCGCCCACCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTAC < 2:175631/76‑1 CATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAAT > 2:4940865/1‑76 CATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAAT > 1:2061151/1‑76 CATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCAAGGTGTGAATGTGGATTTTGTACTACGAAAT > 1:634727/1‑76 ATTAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATA > 1:3635380/1‑76 TAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAAT > 1:6636098/1‑76 TAGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAAT > 1:3927295/1‑76 AGATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATT > 1:2106798/1‑76 atTTTCACCAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATT < 2:6757880/74‑1 ATTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGC > 1:6265915/1‑76 TTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCC > 1:2007852/1‑76 TTTCA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCC > 1:5880762/1‑76 CA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTT > 1:909461/1‑76 CA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTT > 1:6183919/1‑76 CA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTT > 2:1336459/1‑76 CA‑CAG‑CCAGCCAGCCAGCCAGCCAGCCAGACAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTT > 2:6563598/1‑76 A‑CAG‑CCAGCCAGCCAGCGAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTA > 2:5310807/1‑76 cacCCACCCACCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTAT < 2:5072061/73‑1 acCCACCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATT < 2:2219753/74‑1 G‑CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTA > 2:707393/1‑76 CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTAT > 2:2762769/1‑76 CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTAT > 2:5297657/1‑76 CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTAT > 2:3285528/1‑76 CCAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTAT > 2:4809107/1‑76 CCACCCAGCCGGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTAT < 1:618972/76‑1 |||||| AAACATGGCTATACAATGAAAACTGCTTCGTTATTGACTTCGAATATAAAGGGGTGAAA‑TTTGCATTAGATTTCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/2103813‑2103887‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGCCAGCCAGCCAGCCAGCCAGCCAGCCAGGTGTGAATGTGGATTTTGTACTACGAAATAATTGCCCTTATTAT > REL606/2103888‑2103962 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |