| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2103888 = | 63 (0.290) | 50 (0.370) | 29/96 | 5.6 | 69.4% | coding (155/216 nt) | ECB_01992 | hypothetical protein |
| ? | REL606 | = 2103891 | 4 (0.030) | coding (158/216 nt) | ECB_01992 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
Only 100 of 145 total aligned reads displayed.
TTCTTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2103989‑2103888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctggctggctggctggctggct‑gGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT < REL606/2103891‑2103817 CTTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTG > 2:4314276/1‑76 TTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCT < 2:4454647/76‑1 TTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCT > 2:3808746/1‑76 TTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCT > 1:747322/1‑76 TTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCT < 2:3966361/76‑1 TTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTG > 2:1840174/1‑76 TTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTG > 1:3980061/1‑76 TTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGG > 1:5864379/1‑76 TAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGC < 1:4252925/76‑1 TAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGC > 1:3012790/1‑76 AGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCT > 2:1303263/1‑76 GTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTG > 1:6383479/1‑76 GTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAAACCACATTCACACCTGGCTGGCTGGCTG < 1:375460/76‑1 TTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCT > 1:5569151/1‑76 TGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTG > 1:6140362/1‑76 GCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGG < 2:2626391/76‑1 GCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCAACATTCACACCTGGCTGGCTGGCTGGCTGG > 1:6957055/1‑76 CTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCGCATTCACACCTGGCTGGCTGGCTGGCTGGCT < 1:94591/76‑1 CTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCT > 2:5797242/1‑76 TTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGG > 2:1930623/1‑76 TTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGC < 2:3927735/76‑1 TATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGgt > 1:1444672/1‑74 GTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGGTTGCTGGgg > 1:5894985/1‑74 ATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GG < 2:2762769/76‑1 ATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GG < 2:3285528/76‑1 ATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GG < 2:4809107/76‑1 ATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GG < 2:5297657/76‑1 ATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCCGGCTGGGT‑GG > 1:618972/1‑76 AATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGGT‑GGgt > 2:2219753/1‑74 TAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTCGCTGGCTGGCT‑GGCT‑GT < 2:5310807/76‑1 AAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGTCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTG < 2:6563598/76‑1 AAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTG < 1:909461/76‑1 GGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAA < 1:2007852/76‑1 AATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCTGGTGAAAat > 2:6757880/1‑74 AATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCT < 1:2106798/76‑1 ATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTA < 1:3927295/76‑1 ATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTA < 2:2374981/76‑1 TATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAAT < 1:3635380/76‑1 ATTTCGTAGTACAAAATCCACATTCACACCTTGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATG < 1:634727/76‑1 ATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATG < 2:4940865/76‑1 TTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGGT‑GGGT‑GTGTAAAATAATGC > 2:4972957/1‑76 GTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGGTGGGCG‑GTGAAATCTAATGC‑AAA > 2:175631/1‑76 AAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCC < 1:5852431/76‑1 AATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCT < 2:5687850/76‑1 TCCACATTCACTCCTGGCTGGCTGGCTGGCTGGCTGGCTCGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTT < 2:5565193/76‑1 CCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTA < 1:5397864/76‑1 CACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTAT < 1:3458718/76‑1 CACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTAT < 1:2237010/76‑1 ACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCGCCCCTTTATA < 1:5787538/76‑1 CATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATAT < 1:6010091/76‑1 TTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTC < 1:6203754/76‑1 TCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCG < 1:2450341/76‑1 CCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTC < 1:6269749/76‑1 CTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCA < 2:5686862/76‑1 TGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAA < 1:2618109/76‑1 TGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAA < 1:2537690/76‑1 GCTGGCTGCCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATA < 2:5509259/76‑1 CTGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAA < 1:3327344/76‑1 TGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAAC < 2:2931957/76‑1 TGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAAC < 1:5168522/76‑1 TGGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GGGAAATCTTATGC‑AAAATTTACCCCTTTTTATTTGAAATCAATAAC > 1:1129191/1‑76 GGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACG < 2:5519026/76‑1 GGCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACG < 1:3841428/76‑1 GCTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGA < 2:2574522/76‑1 CTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTTACCCCTTTATATTCGAAGTCAATAAAGAA > 2:3215311/1‑76 CTGGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAA < 1:3566386/76‑1 GGCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATTTAATGC‑CAATTTCACCCCTTTATATTCGAAGTCAATAACCAAGC > 1:1348915/1‑76 GCTGGCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCA < 1:1623954/76‑1 TGGCTGGCTGGCTGGCT‑GGCT‑GTGAAAACTAATGCAAAATTTCCCCCCTTT‑TATTCGAAGTCAATAACGAAACAGT > 2:364799/1‑76 GCTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTT < 2:4765320/76‑1 CTGGCTGGGTGGCT‑GGCC‑GTGGAATCTAATGC‑AAATTTTACCCCTTTATATTCGAAGTCAATAACGGAGCAGTTTT > 2:2828223/1‑76 CTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTT < 1:3053637/76‑1 CTGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTT < 2:1451935/76‑1 TGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTC < 2:6701680/76‑1 TGGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTC > 1:3264666/1‑76 GGCTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCA < 1:2143203/76‑1 CTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATT > 1:5282305/1‑76 CTGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATT < 1:2926125/76‑1 TGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTG < 2:939647/76‑1 TGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTG > 1:5580590/1‑76 TGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTG < 1:4254286/76‑1 TGGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTG < 1:4696485/76‑1 GGCTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGT > 1:4189634/1‑76 CTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTAT < 1:238628/76‑1 CTGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTAT < 1:5076532/76‑1 TGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATA > 1:445194/1‑76 TGGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATA < 2:4780293/76‑1 GGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAG > 1:3759868/1‑76 GGCT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAG > 2:6606421/1‑76 GCT‑CGCT‑GTGAAATCTAATGC‑AAATTTCTCCCCTTTATATTCGAAGTCAATAACGAAGGAGTTTTCATTGTATAGC < 2:6173700/76‑1 CT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCC < 1:3063613/76‑1 CT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCC > 2:2936289/1‑76 CT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCC > 1:1290092/1‑76 CT‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCC > 2:917750/1‑76 T‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCA > 1:617958/1‑76 T‑GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCA > 2:1400059/1‑76 GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT > 2:3122877/1‑76 GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT > 1:4039942/1‑76 GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT > 2:1101023/1‑76 GGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT < 1:1056300/76‑1 TTCTTTTTTAGTGTTGCCTTTTATAGTATAATAAGGGCAATTATTTCGTAGTACAAAATCCACATTCACACCTGGCTGGCTGGCTGGCTGGCTGGCTGGCT‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/2103989‑2103888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggctggctggctggctggctggct‑gGCT‑GTGAAATCTAATGC‑AAATTTCACCCCTTTATATTCGAAGTCAATAACGAAGCAGTTTTCATTGTATAGCCAT < REL606/2103891‑2103817 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |