| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2038236 = | 124 (0.580) | 5 (0.030) | 4/136 | 20.6 | 4.0% | coding (713/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | 2038515 = | 127 (0.650) | coding (434/822 nt) | wbbB | putative glycosyltransferase WbbB | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 133 total aligned reads displayed.
TATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGT > REL606/2038440‑2038588 | tatTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGata < 2:2002587/76‑1 (MQ=255)tatTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGata > 1:2700828/1‑76 (MQ=255) atTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGatat > 2:4896805/1‑76 (MQ=255) atTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGatat < 1:252863/76‑1 (MQ=255) atTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGatat < 1:1582311/76‑1 (MQ=255) ttttGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGatata < 2:5486921/76‑1 (MQ=255) tttGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGatatat < 1:4974149/76‑1 (MQ=255) tttGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGatatat < 1:998800/76‑1 (MQ=255) tttGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGatatat < 1:401334/76‑1 (MQ=255) tttGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGatatat > 2:742224/1‑76 (MQ=255) ttGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGAtatata < 1:6700095/76‑1 (MQ=255) ttGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGAtatata > 1:2621988/1‑76 (MQ=255) tGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAg < 1:5316742/76‑1 (MQ=255) ggAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGc < 1:4916881/76‑1 (MQ=255) ggAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGc > 2:2088765/1‑76 (MQ=255) ggAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGc < 1:3026056/76‑1 (MQ=255) aGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCAt > 1:6592315/1‑76 (MQ=255) tGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtatt > 1:6064332/1‑76 (MQ=255) tGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtatt < 2:3151218/76‑1 (MQ=255) tGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtatt > 2:1698339/1‑76 (MQ=255) tGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtatt > 2:4789980/1‑76 (MQ=255) gTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCatatca < 2:6527409/76‑3 (MQ=255) gTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtatta < 1:334148/76‑1 (MQ=255) gTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtatta > 1:1550323/1‑76 (MQ=255) gTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtatta < 1:6183340/76‑1 (MQ=255) gTAGCAACTAACAATTATTTTTGCAGATTTTACATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtatta > 2:5402697/1‑76 (MQ=255) tAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCAtattat > 1:6918337/1‑76 (MQ=255) aGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATattatt > 1:115784/1‑76 (MQ=255) aGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATattatt < 1:6286654/76‑1 (MQ=255) gCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTc < 1:4532149/76‑1 (MQ=255) aaCTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCa > 1:1389601/1‑76 (MQ=255) aaCTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCa > 2:1681076/1‑76 (MQ=255) aaCTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCa < 1:5186176/76‑1 (MQ=255) aaCTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCa > 1:6524591/1‑76 (MQ=255) aaCTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCa > 1:2565785/1‑76 (MQ=255) aCTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCaa > 1:4365534/1‑76 (MQ=255) cTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAag < 1:3047068/76‑1 (MQ=255) tAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAaga > 1:6361248/1‑76 (MQ=255) tAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAaga > 2:6253091/1‑76 (MQ=255) attattTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTAc > 1:627342/1‑76 (MQ=255) ttattTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACt > 2:5986835/1‑76 (MQ=255) attTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGt < 1:3986162/76‑1 (MQ=255) tttttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTa < 2:4839950/76‑1 (MQ=255) tttttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTa < 1:6309676/76‑1 (MQ=255) tttttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTa < 1:6422377/76‑1 (MQ=255) ttttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTaa < 1:6893351/76‑1 (MQ=255) tttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAAc > 1:1804795/1‑76 (MQ=255) tttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAAc < 2:6025933/76‑1 (MQ=255) ttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACa < 1:6103748/76‑1 (MQ=255) ttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACa < 2:6226057/76‑1 (MQ=255) ttGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACa < 1:4570385/76‑1 (MQ=255) cAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACatat > 2:1458887/1‑76 (MQ=255) cAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACatat > 2:2391424/1‑76 (MQ=255) cAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACatat < 1:5775202/76‑1 (MQ=255) cAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACatat > 2:3860627/1‑76 (MQ=255) aGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACatata > 1:199442/1‑76 (MQ=255) aTTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtatt < 2:4071120/76‑1 (MQ=255) aTTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtatt < 2:4154613/76‑1 (MQ=255) tttttCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtatta < 2:798125/76‑1 (MQ=255) tttttCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtatta < 1:396854/76‑1 (MQ=255) ttttCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtattat > 2:3729262/1‑76 (MQ=255) ttttCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtattat < 1:1871941/76‑1 (MQ=255) ttCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtattatta > 2:160856/1‑76 (MQ=255) ttCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtattatta > 2:2283549/1‑76 (MQ=255) tCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATAtattattat < 2:1882056/76‑1 (MQ=255) cATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATtata < 2:3234693/76‑1 (MQ=255) cATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATtata > 1:4131690/1‑76 (MQ=255) cATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATtata < 2:5474433/76‑1 (MQ=255) cATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATtata < 2:6780726/76‑1 (MQ=255) cATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATtata > 1:1337433/1‑76 (MQ=255) aTTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATaa > 2:1159658/1‑76 (MQ=255) ttattaGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAgg < 2:1727187/76‑1 (MQ=255) ttattaGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAgg > 1:3534382/1‑76 (MQ=255) ttattaGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAgg > 1:6454614/1‑76 (MQ=255) tattaGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGa > 1:1833405/1‑76 (MQ=255) tattaGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGa > 1:4564309/1‑76 (MQ=255) ttaGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATc > 1:4280463/1‑76 (MQ=255) taGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCt < 2:225273/76‑1 (MQ=255) aGCATACAAAAGGAGGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTa > 2:428762/1‑76 (MQ=255) gCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTaa < 2:5802670/76‑1 (MQ=255) gCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTaa > 1:3588471/1‑76 (MQ=255) cATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAAAATATATTATTATAAGGATCTaaa < 1:2391041/76‑1 (MQ=255) aTACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAAc < 1:5548430/76‑1 (MQ=255) aTACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAAc < 1:1565036/76‑1 (MQ=255) tACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACg < 2:5092830/76‑1 (MQ=255) tACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACg > 1:1186888/1‑76 (MQ=255) tACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACg < 2:476269/76‑1 (MQ=255) tACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACg < 2:3386895/76‑1 (MQ=255) tACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACg > 2:2559244/1‑76 (MQ=255) aCAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGa > 1:4976213/1‑76 (MQ=255) aCAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGa > 1:5750871/1‑76 (MQ=255) cAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGAc < 1:5909095/76‑1 (MQ=255) aaGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTg < 2:4994839/76‑1 (MQ=255) aaGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTg < 1:90210/76‑1 (MQ=255) aGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGc < 1:6670248/76‑1 (MQ=255) gAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCa > 2:27903/1‑76 (MQ=255) aaGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCAt > 2:1855725/1‑76 (MQ=255) atatatAGCGATTTATATTATTCCAAGAGTTACTTTAACATATATTATTATAAGGATCTAAACGCCCTGCCATTGt < 2:214823/76‑1 (MQ=255) atatatAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGCCCTGCCATTGt < 2:1281224/76‑1 (MQ=255) atatatAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGt > 1:2075477/1‑76 (MQ=255) | TATTTTGGAAGCTCATTGTAGCAACTAACAATTATTTTTGCAGATTTTTCATTTATTAGCATACAAAAGGAAGATATATAGCCATTCATATTATTCCAAGAGTTACTGTAACATATATTATTATAAGGATCTAAACGACCTGCCATTGT > REL606/2038440‑2038588 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |