New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	3298204 =	141 (0.890)	4 (0.030)	3/146	18.4	2.5%	coding (45/876 nt)	nanK	N‑acetylmannosamine kinase
	?	REL606	= 4266119	171 (1.110)					coding (186/1959 nt)	acs	acetyl‑coenzyme A synthetase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTACAACACAGCGATGAAAAAGGCGGTGCTATGACCACACTGGCGATTGATATCGGCGGTAC‑TAAACTTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3298279‑3298204 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGCA  <  REL606/4266119‑4266045                                                                                                                                                          GGTACAACACAGCGATGAAAAAGGCGGTGCTATGACCACACTGGCGATTGATATCGGCGGGAC‑TAAACTTTCCGCC                                                                             >  1:4265476/1‑76    ACAACACAGCGATGAAAAAGGCGGTGCTATGACCACACTGGCGATTGATATCGGCGGTTC‑TAAACTTGGCGCCCcg                                                                          >  2:4271197/1‑74    ACAACACAGCGATGAAAAAGGCGGTGCTATGACCACACTGGCGATTGATATCGGCGGGACGTAAACTTGCCCCCCG                                                                           >  2:2326563/1‑76                                                       CGGCGGTAC‑TAAACTTGCCGCCCGGTAATGTGTCCATTAAATGGTACGAGG                                                >  1:1746469/1‑51                                                       CGGCGGTAC‑TAAACTTGCCGCCCGGTAATGTGTCCATTAAATGGTACGAGG                                                <  2:1746469/51‑1                                                                          ccgCCGGTAAGGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCT     <  2:3373392/73‑1                                                                            CCCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGC   <  1:1078711/76‑1                                                                            CCCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGC   >  1:1726408/1‑76                                                                            CCCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGC   >  1:90340/1‑76                                                                             CCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGCA  <  1:4232136/76‑1                                                                             CCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGCA  <  1:728631/76‑1                                                                                                                                                          GGTACAACACAGCGATGAAAAAGGCGGTGCTATGACCACACTGGCGATTGATATCGGCGGTAC‑TAAACTTGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3298279‑3298204 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccCGGTAATGTGTCCATTAAATGGTACGAGGACGGCACGCTGAATCTGGCGGCAAACTGCCTTGACCGCCATCTGCA  <  REL606/4266119‑4266045

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.