Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*REL6063,472,7000CG44.1% 44.7 / 75.0 68A290G (GCG→GGG) yhgApredicted transposase
Reads supporting (aligned to +/- strand):  ref base C (27/11);  new base G (0/30);  total (27/41)
Fisher's exact test for biased strand distribution p-value = 1.92e-10
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 117 total aligned reads displayed.

TAATGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGCCACCAGCAGGTGACAA  >  REL606/3472625‑3472775
                                                                              |                                                                           
taatGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTgcggc                                                                             >  2:2696481/1‑76 (MQ=255)
taatGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTgcggc                                                                             >  1:2124256/1‑76 (MQ=255)
taatGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTgcggc                                                                             <  1:175519/76‑1 (MQ=255)
taatGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTgcggc                                                                             >  1:1690782/1‑76 (MQ=255)
taatGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTgcggc                                                                             <  1:4038591/76‑1 (MQ=255)
taatGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTgcggc                                                                             >  2:337171/1‑76 (MQ=255)
taatGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTgcggc                                                                             <  2:4921893/76‑1 (MQ=255)
 aatGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTgcggcg                                                                            <  2:3908570/76‑1 (MQ=255)
  atGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGa                                                                           <  1:2359144/76‑1 (MQ=255)
   tGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAg                                                                          <  1:1489820/76‑1 (MQ=255)
   tGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAg                                                                          <  1:4352311/76‑1 (MQ=255)
    gCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGc                                                                         >  1:995635/1‑76 (MQ=255)
     cTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAggc                                                                        >  1:1493677/1‑74 (MQ=255)
     cTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAggc                                                                        >  2:4872046/1‑74 (MQ=255)
     cTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGcc                                                                        <  1:1329370/76‑1 (MQ=255)
     cTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGcc                                                                        <  1:3266329/76‑1 (MQ=255)
      ttGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCa                                                                       >  2:768426/1‑76 (MQ=255)
      ttGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCa                                                                       <  1:1834417/76‑1 (MQ=255)
      ttGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCa                                                                       >  1:1755976/1‑76 (MQ=255)
       tGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGGCAg                                                                      >  1:1668321/1‑76 (MQ=255)
       tGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAg                                                                      <  2:4930401/76‑1 (MQ=255)
       tGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAg                                                                      <  2:1236408/76‑1 (MQ=255)
         aacccGGACTCCCTCTTAAAGACATCATGCGCTTCCCGGGGGTGCAAGAAGAAGGGTGGGCGGGGGGGAGCCAGTa                                                                    <  2:752404/73‑1 (MQ=255)
         aaTCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGGCGACCCAga                                                                     >  1:105894/1‑75 (MQ=255)
           tCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGGGGCGAGCCAGTaaa                                                                  >  2:1654405/1‑76 (MQ=255)
           tCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTaaa                                                                  >  2:4981012/1‑76 (MQ=255)
           ccgggAGCCCCTCTTACAGACATCATGCGCTTTCCGGGGGTGTAAGAAGAAGAGTGGGCGGGGGGGAGCCAGTaaa                                                                  <  2:1331325/73‑1 (MQ=255)
            ccGGGGTCCCTTCTTACAGACATCATGCGCTTTGCGGGGGTGTAAGAAGAAGGGTGGGCGGGGGGGAGCCAGTaaa                                                                  <  2:2968145/76‑1 (MQ=255)
            ccGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGGGAGCCAGTaagt                                                                 >  2:4514666/1‑74 (MQ=255)
            ccGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAAt                                                                 >  1:1634381/1‑76 (MQ=255)
             cGGCGTCCCACTTACAGACATAAGCGGTTTGCCGGGGGTGTGAGAAGAAGAGTTGGTGGGGGGGAGCCAGTAAAtt                                                                <  2:2301509/76‑1 (MQ=255)
             cGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGGaaaat                                                                >  1:4664738/1‑74 (MQ=255)
             cGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCCGGAAAttt                                                               >  1:1132751/1‑76 (MQ=255)
              ggAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGGCAGTAAAttt                                                               >  1:1500807/1‑76 (MQ=255)
              ggAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAAttt                                                               >  1:2535678/1‑76 (MQ=255)
                agccccTCTTCCAGACATCTTGCTCTTTCCGGGGGTGTAAGAAAAAGAGTGGGCTGCGGGGAGCCAGTAAATTTCt                                                             <  2:2762022/73‑1 (MQ=255)
                aGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCt                                                             >  1:3595340/1‑76 (MQ=255)
                 cccccTCTAAAAGACATCATGCGCTTTGCGGGGGTGTAAGAAGAAGGGTGGGCGGCGGGGAGCCAGTAAATTTCTg                                                            <  2:3841397/74‑1 (MQ=255)
                  tCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGACAGTAAATTTCttt                                                           >  1:1654563/1‑74 (MQ=255)
                    ccTCTTACAGACTTCATGCCCTTTGCCGGGGTGTCAGAAGAAGAGTTGGCTGGGGGGAGCCAGTAAATTTCTGtct                                                         <  2:4628207/76‑1 (MQ=255)
                    ccTCTAACAGACATCATGCGCTTTGCGGGGGTGTAAGAAGAAGAGTTGGCTGCGGGGAGCCAGTAAATTTCTGtct                                                         <  2:3288708/76‑1 (MQ=255)
                     ctctTACAGACATCATGCGCTTTACGGGGGTGTCAGAAGAAGAGTTGGCTGCGGGGAGCCAGTAAATTTCTGtctc                                                        <  2:1344927/76‑1 (MQ=255)
                     ctctTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGtctc                                                        >  1:4204407/1‑76 (MQ=255)
                     ctctTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGtctc                                                        >  1:3806458/1‑76 (MQ=255)
                       tctTACAGACATCATGCTCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGGGGCGAGCCAGTAAATTTCTGTCTCg                                                       <  2:3782398/76‑1 (MQ=255)
                       tctTACAGACATCATGCGCTTTACGGGGGTGTAAGAAGAAGGGTGGGCTGGGGGGAGCCAGTAAATTTCTGTCTCg                                                       <  1:2477962/76‑1 (MQ=255)
                       tctTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGGGGCCGGAAAATTCTGtctcc                                                       >  1:235344/1‑75 (MQ=255)
                       tctTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCCGGAAATTTCTGtctcc                                                       >  2:429835/1‑75 (MQ=255)
                       tctTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGtttcc                                                       >  1:4715361/1‑75 (MQ=255)
                       tctTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCg                                                       >  2:2200807/1‑76 (MQ=255)
                       tctTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAAATTCTTGCTCg                                                       >  2:2388639/1‑76 (MQ=255)
                         ttACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGAAAATTTCTGTTTCGcc                                                     >  1:3948391/1‑76 (MQ=255)
                            agcacacCATGCCCTTTGCGGGGGTGTAAAAAAAGGGGGTGGCGGGGGGGAGCCAGTAAATTTCTGTCTCGCCAtt                                                  <  1:442637/73‑1 (MQ=255)
                            aaaaCAGCATGCTTTTTCCGGGGGTGTAAGAAGAGGGTTGGGCGGGGGGGAGCCAGTAAATTTCTGTCTCGCCAtt                                                  <  1:4226368/73‑1 (MQ=255)
                             aGACATCATGCGTTTTGCGGGGGTGTAAGAAGAAGGGTGGGCGGCGGGGAGCCAGTAAATTTCTGTCTCGCCAttt                                                 <  1:4538744/76‑1 (MQ=255)
                             aGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCCttt                                                 >  1:454118/1‑76 (MQ=255)
                              gACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGACAGTAAATTTTTGTCTCGCCActtt                                                >  1:4384965/1‑75 (MQ=255)
                               aCATCATGCTCTTTGCGGGGGTCTGAAAAGAAGAGTGGGCGGGGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCa                                               <  1:4179519/76‑1 (MQ=255)
                               aCATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGCGGCCGTAAATTTCTGTCTCGCCCtttta                                               >  2:614938/1‑74 (MQ=255)
                               aCATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCCTTTCa                                               >  2:4161374/1‑76 (MQ=255)
                                catcatGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGGAAATTTCTGTCTCGCCACTTCaa                                              >  1:3322423/1‑76 (MQ=255)
                                catcagGCGTTTTACGGGGGTGAAAGAAGAAGAGTGGGCGGCGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCaa                                              <  1:329059/76‑1 (MQ=255)
                                 atcctGCGCTTTGCCGGGGTGTAAGAGGAAGGGTGGGCGGCGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCaaa                                             <  2:4415378/76‑1 (MQ=255)
                                 atcatGCGCTTTCCGGGGGTGTAAGAAGAAGAGTTGGCGGCGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCaaa                                             <  2:3408318/76‑1 (MQ=255)
                                       cgcTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCTAAAGTTGc                                       >  2:76080/1‑76 (MQ=255)
                                         cTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCCCCCTTTCAAAAATTGCCt                                     >  1:3421243/1‑76 (MQ=255)
                                         cTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGACAGGAAATTTCTGTCTCGCCATTTCAAAAGTTGCCt                                     >  2:188098/1‑76 (MQ=255)
                                          tttACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGGCAGTAAATTTCTGTCTCGCCCTTTCAAAAGTTGGCtc                                    >  2:2949109/1‑75 (MQ=255)
                                           ttACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCCGTAAATTTCTGTCTCCCCATTTCTAAAATTGCCttc                                   >  2:4141116/1‑74 (MQ=255)
                                            tACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGCGCCAGAGAAATTTTCTGTCGCCCTTTTTAAAATTGTCTgca                                  >  1:4217569/1‑76 (MQ=255)
                                            tACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTTCTTCTCGCCCCTTTAAAAATTGCCcaca                                  >  1:1422568/1‑76 (MQ=255)
                                             aCCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGGGCCAGTAAATTTCTGTCTCGCCCTTTCAAAAGTTGCCTacac                                 >  1:1895641/1‑76 (MQ=255)
                                               cgggggggTCAGAAGAAGGGTTGGCTGGGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACAcc                                <  1:1178940/74‑1 (MQ=255)
                                               cgggggTGAAAGAAGAAGGGTGGGCTTGTGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACAcc                                <  2:4031661/74‑1 (MQ=255)
                                               cGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTTTGTCTCGCCATTTCCAAAGTTGCCTACAccc                               >  2:1090259/1‑76 (MQ=255)
                                                 ggggTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGGTGCCTACccccc                              >  1:2049279/1‑75 (MQ=255)
                                                   ggTGTCAGAAGAAGAGTGGGCGGGGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCctct                            <  2:2386379/76‑1 (MQ=255)
                                                    gtgtCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCCCTg                           >  1:3629932/1‑76 (MQ=255)
                                                    gtgtAAGAAGACGAGGGGGCTGCGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTg                           <  2:4087752/76‑1 (MQ=255)
                                                    gtgtAAGAAAGAGAGTGGGCGGCGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTg                           <  2:461650/76‑1 (MQ=255)
                                                     tgtCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTTTGTCTCGCCCTTTCAAAAGTTGCCTACACCCTCTGc                          >  1:3129033/1‑76 (MQ=255)
                                                       tCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCCTTTCAAAAATTGCCTACACCCCCTGCtt                        >  2:2818714/1‑76 (MQ=255)
                                                       gaagaagaagaGGTGGCGGCGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCtt                        <  2:3502840/74‑1 (MQ=255)
                                                        cAGAAGAAGGGTGGGCTGCGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTc                       <  2:123660/76‑1 (MQ=255)
                                                        cAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTc                       >  2:4812048/1‑76 (MQ=255)
                                                        cAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAATTGCCTACACCCTCTGCTTc                       >  2:2706521/1‑76 (MQ=255)
                                                        aagaagaaggGTGGGCTGCGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTc                       <  2:2321001/75‑1 (MQ=255)
                                                         agaagagggGTGGGCGGGGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCa                      <  1:1587194/76‑1 (MQ=255)
                                                         agaagaagaGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCa                      >  1:662543/1‑76 (MQ=255)
                                                           aagaggaGTGGGCTGGGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAAc                    <  2:3944354/76‑1 (MQ=255)
                                                              aagaGTTGGCTGATGCGAGCCCGAAAAATTCTGACTCGCCTTTTCCAAAAGTGCCGAAACCCTCTGCTTCAACAcc                 >  2:5073338/1‑76 (MQ=255)
                                                                 ggTTGGCGGGGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGccacc              <  1:4485928/75‑1 (MQ=255)
                                                                 agTTGGCTGCGGCGAGCCAGTAAATTTTTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGccacc              >  1:2395636/1‑76 (MQ=255)
                                                                   tgggCTGGGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGCCACcag            <  2:2361282/74‑1 (MQ=255)
                                                                    tGGCTGGGGCGAGCCCGTAAATTTCTTTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGCCCCccgc           >  2:1031834/1‑76 (MQ=255)
                                                                    tGGCTGCGGCGAGGCAGTAAATTTTTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCCGCTTCACAGCCACcagc           >  2:646755/1‑76 (MQ=255)
                                                                     ggCTGGGGCGAGCCAGTAAAATTTTGTCTCGCCATTTTAAAAGTTGGCTACACCCTCTGCTTCAACGccaccaccc          >  2:4274450/1‑73 (MQ=255)
                                                                     ggCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGCCACcagca          >  1:705335/1‑76 (MQ=255)
                                                                      gCTGGGGGGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGCCACcagcag         <  1:4060234/76‑1 (MQ=255)
                                                                              cgAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGCCACCAGCAGGCGACaa  >  1:1285945/1‑76 (MQ=255)
                                                                              |                                                                           
TAATGCTTGAATCCGGAGTCCCTCTTACAGACATCATGCGCTTTACCGGGGTGTCAGAAGAAGAGTTGGCTGCGGCGAGCCAGTAAATTTCTGTCTCGCCATTTCAAAAGTTGCCTACACCCTCTGCTTCAACGCCACCAGCAGGTGACAA  >  REL606/3472625‑3472775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: