| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | REL606 | 4,202,363 | G→A | T66I (ACA→ATA) | iclR ← | DNA‑binding transcriptional repressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 4,202,363 | 0 | G | A | 100.0% | 53.1 / NA | 15 | T66I (ACA→ATA) | iclR | DNA‑binding transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (5/10); total (5/10) | |||||||||||
ATAAAGGCATGTGCGCCGATTGCCCAATGTCCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACAC > REL606/4202291‑4202432 | aTAAAGGCATGTGCGCCGATTGCCCAATGTCCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTATgg < 1:242545/76‑1 (MQ=255)aTAAAGGCATGTGCGCCGATTGCCCAATGTCCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTATgg < 2:635560/76‑1 (MQ=255) aaGGCATGTGCGCCGATTGCCCAATGTCCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTATGGTTa < 2:675124/76‑1 (MQ=255) gtgCGCCGATTGCCCAATGTCCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTATGGTTAGCAGGCg > 1:655189/1‑76 (MQ=255) gATTGCCCAATGTCCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTATGGTTAGTAGGCGGTGGGtg > 1:622184/1‑75 (MQ=255) ttGCCCAATGTCCCAGTTCGCCGACCTGACGCACGAATCCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGt < 2:174772/76‑1 (MQ=255) cccAATGTTCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGTGGa < 1:425905/76‑1 (MQ=255) cccAATGGTCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGTGGa < 1:425908/76‑1 (MQ=255) gTCCCAGTTCGCCGACCTGACGCACCAAACCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGTGGAATTggg < 1:313079/76‑1 (MQ=255) cccAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTa < 1:641337/76‑1 (MQ=255) cGACCTGACGCACGAAACCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCttg > 1:550069/1‑76 (MQ=255) aCGAAACCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGtt < 2:197032/76‑1 (MQ=255) gAAACCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTcc < 2:40382/76‑1 (MQ=255) aaCCCTGCTGTTGCATTATGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGt > 2:495005/1‑76 (MQ=255) tGCATTATGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCacac > 1:519273/1‑76 (MQ=255) | ATAAAGGCATGTGCGCCGATTGCCCAATGTCCCAGTTCGCCGACCTGACGCACGAAACCCTGCTGTTGCATTGTGGTTAGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACAC > REL606/4202291‑4202432 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |