mutation predictions | marginal predictions | summary statistics | genome diff | command line log
|
breseq version 0.33.1 revision 8505477f25b3
mutation predictions | marginal predictions | summary statistics | genome diff | command line log |
| Marginal read alignment evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | REL606 | 1,688,990 | 0 | A | C | 40.8% | 55.0 / 29.0 | 49 | T92P (ACC→CCC) | nth | DNA glycosylase and apyrimidinic (AP) lyase (endonuclease III) |
| * | REL606 | 3,492,082 | 0 | T | G | 40.0% | 28.7 / 25.9 | 35 | V490G (GTG→GGG) | glpD | sn‑glycerol‑3‑phosphate dehydrogenase, aerobic, FAD/NAD(P)‑binding |
| * | REL606 | 254,101 | 0 | T | G | 39.1% | 14.6 / 10.9 | 23 | pseudogene (530/1710 nt) | fhiA | b0229; flagellar system protein |
| * | REL606 | 275,418 | 0 | A | C | 37.8% | 42.5 / 19.5 | 37 | F528V (TTT→GTT) | yagW | predicted receptor |
| * | REL606 | 4,584,031 | 0 | T | G | 37.5% | 40.5 / 12.4 | 32 | intergenic (‑74/+141) | yjiZ/yjjM | predicted transporter/putative transcriptional regulator; b4357_1 |
| * | REL606 | 1,176,010 | 0 | T | G | 35.3% | 40.5 / 20.1 | 34 | A37A (GCA→GCC) | fhuE | ferric‑rhodotorulic acid outer membrane transporter |
| * | REL606 | 3,691,844 | 0 | T | G | 35.0% | 62.6 / 12.0 | 40 | N226T (AAC→ACC) | yiaY | predicted Fe‑containing alcohol dehydrogenase |
| * | REL606 | 417,321 | 0 | T | G | 32.1% | 39.0 / 11.4 | 28 | T27P (ACA→CCA) | ECB_00378 | conserved hypothetical protein |
| * | REL606 | 4,574,252 | 0 | T | G | 32.1% | 37.1 / 12.7 | 28 | S5S (TCA→TCC) | hpaX | hypothetical 4‑hydroxyphenylacetate permease |
| * | REL606 | 4,000,295 | 0 | T | G | 27.3% | 77.4 / 11.9 | 44 | G533G (GGT→GGG) | ubiB | putative ubiquinone biosynthesis protein UbiB |
| * | REL606 | 2,568,967 | 0 | A | C | 26.3% | 64.5 / 14.2 | 38 | G1380G (GGT→GGG) | yfhM | hypothetical protein |
| * | REL606 | 2,448,098 | 0 | T | G | 23.8% | 87.6 / 13.0 | 42 | F278V (TTT→GTT) | nupC | nucleoside (except guanosine) transporter |
| * | REL606 | 3,129,645 | 0 | A | C | 21.6% | 111.5 / 10.4 | 51 | V944G (GTG→GGG) | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |