| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | REL606 | 1,305,418 | IS150 (–) +2 bp | coding (821‑822/1461 nt) | cls ← | cardiolipin synthetase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 590471 | NA (NA) | 45 (0.940) | 34/148 | 0.4 | 100% | noncoding (1977/1977 nt) | IS150 | repeat region |
| ? | REL606 | = 1305419 | 0 (0.000) | coding (821/1461 nt) | cls | cardiolipin synthetase | |||||
| * | ? | REL606 | 1305418 = | 0 (0.000) | 51 (1.050) | 35/150 | 0.4 | 100% | coding (822/1461 nt) | cls | cardiolipin synthetase |
| ? | REL606 | = 2775877 | NA (NA) | noncoding (1/1443 nt) | IS150 | repeat region | |||||
ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/590401‑590471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAGATGTCAATATTAT < REL606/1305419‑1305347 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCCACTTTTTGGGNTCAGTACATTccc > 1:206552/1‑73 CTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTT < 1:572149/76‑1 nCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTNAGTACATTATTTAT > 2:215690/2‑76 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTAT > 1:1289014/1‑76 CCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTAT > 2:739892/1‑76 ATTGAATATCGGAATCAGTCCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCC > 1:117824/1‑76 ATTGAATATCGGAATCAGACCTAGATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCC < 1:1315460/76‑1 TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCT < 2:1337517/76‑1 TTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCT < 2:1100529/76‑1 TGAATATCGGAATCAGACNTATATGCCTCGTGTTTAACTCTCCAACATTTTGGGGTCAGTACATTATTTATTCCTG > 1:1460825/1‑76 TGAATACCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTG < 2:494971/76‑1 ATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGA < 1:1199709/76‑1 TATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGAC > 2:923585/1‑76 ATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACT > 1:1123656/1‑76 GGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGG < 1:1290831/76‑1 AATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAG < 1:412670/76‑1 TCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGAT < 1:1369542/76‑1 CAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATT < 2:516033/76‑1 AGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTG > 1:903409/1‑76 CCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAA < 1:810730/76‑1 CTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAAC > 1:489091/1‑76 ATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCG < 1:336976/76‑1 GCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAA < 2:504797/76‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAA < 1:913079/76‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAA < 1:913081/76‑1 CCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAA < 1:913100/76‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTA < 2:571495/76‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTA < 2:571479/76‑1 GTGTTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTA < 1:1291901/76‑1 TTTAACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTC < 1:288935/76‑1 AACTGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGC > 1:952928/1‑76 TGTCCAACTTTTTGGGGTCATTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGC < 1:605748/76‑1 TGTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGC < 1:605744/76‑1 GTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCC > 2:180809/1‑76 GTCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCC > 1:815391/1‑76 TCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCA > 2:1069819/1‑76 TCCAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCA > 2:566105/1‑76 CAACTTTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACC < 2:555750/76‑1 TTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAG < 1:1493487/76‑1 TTTTGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAG > 2:886832/1‑76 TGGGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAGATG < 2:566262/76‑1 GGGTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAGATGTC > 1:403047/1‑76 GTCAGTACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAGATGTCAA < 2:117824/76‑1 TACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAGATGTCAATATTA > 1:686615/1‑76 ACATTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGTCACCACCAGATGTCAATATTAT < 1:1076164/76‑1 ACTCCAATTGAATATCGGAATCAGACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/590401‑590471‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aTTATTTATTCCTGCGACTGGGAGATTGAAACCGGAAAACGTATTCTGCCGCCACCACCAGATGTCAATATTAT < REL606/1305419‑1305347 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |