| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1830975 | 40 (0.820) | 3 (0.070) | 3/136 | 6.5 | 6.1% | coding (233/1359 nt) | ydjE | predicted transporter |
| ? | REL606 | 4151675 = | 56 (1.270) | coding (8/1029 nt) | murB | UDP‑N‑acetylenolpyruvoylglucosamine reductase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGAAATTATTTGA > REL606/1830900‑1831048 | ccTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAAcc > 1:1414544/1‑76 (MQ=255)ccTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAAcc > 1:1258837/1‑76 (MQ=255) cTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAAccc > 1:1173945/1‑76 (MQ=255) gTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCAc > 1:1188646/1‑76 (MQ=255) gTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCAc > 1:896993/1‑76 (MQ=255) ttGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCAcc > 1:667065/1‑76 (MQ=255) tctgcaATACCGANGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCgg < 1:197656/73‑1 (MQ=255) cagcaATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGt > 2:1127333/1‑76 (MQ=255) caATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAag < 2:303777/76‑1 (MQ=255) caATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAag < 2:1471716/76‑1 (MQ=255) aTACCGACGAGGAGAAGAGTGATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAatag < 2:922909/76‑1 (MQ=255) tACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAagaga < 2:664533/76‑1 (MQ=255) aTGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGa < 1:1265293/76‑1 (MQ=255) aTGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGa < 2:344298/76‑1 (MQ=255) aTGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGa > 2:983780/1‑76 (MQ=255) agaagaTTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAAt > 1:1240102/1‑76 (MQ=255) agaagaTTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAAt > 2:1480713/1‑76 (MQ=255) tttATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCaa > 1:1181455/1‑76 (MQ=255) aTGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACa > 1:825513/1‑76 (MQ=255) gCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGCTGAAATAACCAAACAtt > 1:170532/1‑76 (MQ=255) gAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTaa < 2:1065777/76‑1 (MQ=255) aCGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGc < 2:114963/76‑1 (MQ=255) ccTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAg < 1:119437/76‑1 (MQ=255) ccTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAg > 2:192692/1‑76 (MQ=255) cTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAgg > 2:380135/1‑76 (MQ=255) gcgcCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTa > 2:21048/1‑76 (MQ=255) cgccgcCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTaa < 2:517653/76‑1 (MQ=255) aaGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCAt > 1:306630/1‑76 (MQ=255) aGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCAtt < 2:170532/76‑1 (MQ=255) gTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTg > 1:165097/1‑76 (MQ=255) gTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTg > 1:680223/1‑76 (MQ=255) aaTCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAg > 1:577308/1‑76 (MQ=255) aTCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAgg > 1:355755/1‑76 (MQ=255) tCACCGATGAACCCACCGGTAAGAGAGNCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGa > 1:1534659/1‑76 (MQ=255) aCCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGaaa < 2:1414544/76‑1 (MQ=255) ccGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGTGGAAat > 1:1397677/1‑76 (MQ=255) ccGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGAAat < 2:968802/76‑1 (MQ=255) aTGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGAAattat < 2:190631/76‑1 (MQ=255) gAACCCACCGGTAAGAGAGCCGATGAANTAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGAAATTAttt > 1:1533779/1‑76 (MQ=255) gAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGAAATTAttt > 1:675549/1‑76 (MQ=255) accccACCGGTAAGAGAGCCGATGAAATAGCCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGAAATTATTTg < 2:602380/74‑1 (MQ=255) aCCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGAAATTATTTGa < 1:149722/76‑1 (MQ=255) | CCTGTTGCAGCAATACCGACGATGAGAAGATTTATGCGAAACGCCCTGCGCCGCCCAAAGTAATCACCGATGAACCCACCGGTAAGAGAGCCGATGAAATAACCAAACATTAATGCCGAGGTAAAGGCGGCATTGAGGAAATTATTTGA > REL606/1830900‑1831048 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |