| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 3,912,149 | Δ15 bp | coding (28‑42/99 nt) | ilvL → | ilvG operon leader peptide |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 3912149 | 3912163 | 15 | 33 [0] | [0] 33 | ilvL | ilvG operon leader peptide |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3912148 | 0 (0.000) | 28 (1.080) | 25/132 | 0.1 | 100% | coding (27/99 nt) | ilvL | ilvG operon leader peptide |
| ? | REL606 | 3912164 = | 0 (0.000) | coding (43/99 nt) | ilvL | ilvG operon leader peptide | |||||
CAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3912065‑3912148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAA > REL606/3912164‑3912238 CAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAG > 1:480298/1‑76 AAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTG < 2:751376/76‑1 AACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGT < 1:20276/76‑1 ACTCTTTAGGCCTTCTTACGAACAAGATGCCAGAACAGACAANANGACAGGCNTTCTACGAGTGATTAGCGTGGTG < 1:897443/76‑1 TTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGA > 1:899862/1‑76 TTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGA > 2:555976/1‑76 TTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGAT < 2:719378/76‑1 TTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGAT > 1:608079/1‑76 GCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCGACGAGTGATTAGCGTGGTGGTGATTATT > 2:435724/1‑76 CATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTA > 1:410695/1‑76 ATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTAT > 1:244618/1‑76 CTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCA < 1:179548/76‑1 CTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCA < 2:637596/76‑1 TTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCAC < 1:513669/76‑1 CGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCG < 1:169657/76‑1 AACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTG < 1:555599/76‑1 GATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGG < 1:518249/76‑1 AAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTT < 1:555976/76‑1 CAAAATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGA < 2:114739/76‑1 AAATGACAGCCCTTCTACGAGTGATTAGCGTGGCGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGG > 2:322586/1‑76 AATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGA < 2:17195/76‑1 AATGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGA > 2:4500/1‑76 TGACAGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAA > 1:927547/1‑76 AGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCT > 2:45247/1‑76 AGCCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCT > 1:485496/1‑76 CCCTTCTACGAGTGATTAGCGTGGTGGTGATTATTATGCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTA < 2:69635/76‑1 TTCTACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAG < 1:367987/76‑1 TACGAGTGATTAGCGTGGTGGTGATTACTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATC > 2:93373/1‑76 ACGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCA < 1:877789/76‑1 CGAGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAA < 2:480298/76‑1 GATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTT > 2:271292/1‑76 GATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTT > 2:259114/1‑76 TTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGGCGAGGAAAGGCTTAGAGATCAAGCCTTAA < 2:740730/76‑1 AGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACG < 1:45247/76‑1 CGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAA > 2:427965/1‑76 CAAAACCTATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > REL606/3912065‑3912148‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgattagcGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGATCAAGCCTTAACGAA > REL606/3912164‑3912238 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |