New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | REL606 | = 1425702 | NA (NA) | 5 (0.180) | 4/140 | 3.3 | NA | coding (162/267 nt) | ynaE | predicted DNA‑binding transcriptional regulator |
? | REL606 | = 1425860 | NA (NA) | coding (4/267 nt) | ynaE | predicted DNA‑binding transcriptional regulator | |||||
Rejected: Coverage evenness skew score above cutoff. |
GGTGTCTTTTGATTTCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGATATGCCA > REL606/1425813‑1425935 | ggTGTCTTTTGATTTCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAgg > 2:268853/1‑76 (MQ=31) tgtCTTTTGATTTCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGat < 1:201886/76‑1 (MQ=34) tCTTTTGATTTCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGatat < 2:327160/76‑1 (MQ=34) cTTTTGATTTCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATg < 2:44870/76‑1 (MQ=34) cTTTTGATTTCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATg < 1:796399/76‑1 (MQ=34) ttGATTTCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTg > 2:318451/1‑76 (MQ=34) tGATTTCATGAAGATATTCCTTCAANTATTATGGATGTTCATTGCGAGATTGNATGTCTGATNCAGGATATNTTgn > 1:828726/1‑75 (MQ=11) ttCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACtt < 1:159101/75‑1 (MQ=34) ttCATGAAGATATTCCTTAAAATANTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACtt > 2:159101/1‑75 (MQ=21) ttCATGAAGATATTCCTGAAGATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTta < 2:135458/76‑1 (MQ=255) ttCATGAAGATATTCCTAAAGATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTta < 2:135455/76‑1 (MQ=255) cATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTtata < 1:222998/76‑1 (MQ=34) cATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTtata < 2:541123/76‑1 (MQ=34) cATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTtata > 1:915637/1‑76 (MQ=34) aTGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATAc > 1:964736/1‑76 (MQ=34) tatTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGtt > 1:581419/1‑76 (MQ=34) ttCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGtttt < 2:538290/76‑1 (MQ=34) gcTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGt > 2:744792/2‑76 (MQ=21) aaaTATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTggg < 2:309515/76‑1 (MQ=34) tattatTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTa < 2:533589/76‑1 (MQ=34) attattGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTAt > 2:712399/1‑76 (MQ=34) ttattGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTAtt < 2:655053/76‑1 (MQ=34) ttGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGa > 2:917561/1‑76 (MQ=34) ttGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGa > 2:123428/1‑76 (MQ=34) ttGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGa < 1:585570/76‑1 (MQ=34) tGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGat < 1:386252/76‑1 (MQ=34) tGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGat < 1:300309/76‑1 (MQ=34) gATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGata > 2:701018/1‑76 (MQ=34) aTTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGatat > 2:419308/1‑76 (MQ=34) aTTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGatat < 2:353020/76‑1 (MQ=34) tttCATTGCGATATTGTAAGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGATATGc < 1:742052/76‑1 (MQ=21) tCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGATATGCCa < 2:414940/76‑1 (MQ=34) tCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGATTTGTCTGGGTTATTGGATATGCCa < 1:95213/76‑1 (MQ=255) tCACTGCGATATTGTATGTCTGATTAAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGATATGCCa < 2:824559/76‑1 (MQ=255) | GGTGTCTTTTGATTTCATGAAGATATTCCTTAAAATATTATTGATTTTCATTGCGATATTGTATGTCTGATTCAGGATATGTTGACTTATACATCGGTTTTGTCTGGGTTATTGGATATGCCA > REL606/1425813‑1425935 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |