| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3222287 = | 42 (1.420) | 3 (0.110) | 3/136 | 3.7 | 7.3% | intergenic (+29/‑372) | agaI/yraH | galactosamine‑6‑phosphate isomerase/predicted fimbrial‑like adhesin protein |
| ? | REL606 | 3222387 = | 38 (1.420) | intergenic (+129/‑272) | agaI/yraH | galactosamine‑6‑phosphate isomerase/predicted fimbrial‑like adhesin protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATTATATTAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCAAAGTCAGGC > REL606/3222312‑3222462 | aTTATATTAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAAtttt < 1:671075/76‑1 (MQ=255)aTTATATTAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAAtttt > 1:46752/1‑76 (MQ=255)aTTATATTAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAAGAGTTATGTTCAACAATTTAAtttt < 2:479605/76‑1 (MQ=255) ttATATTAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCATAAGGAGTTATGTTCAACAATTTAATTTTa > 1:876379/1‑76 (MQ=255) tataTTAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAg > 2:102532/1‑76 (MQ=255) atTAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGata > 2:203915/1‑76 (MQ=255) tAAATAACATTTGACTGGGTTGACCATAACGCCGAGAGCAAAATGAGTTATGTTCAACAATTTAATTTTAGAtata < 1:667343/76‑1 (MQ=255) tAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGAtata < 1:667333/76‑1 (MQ=255) tAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGAtata < 2:517163/76‑1 (MQ=255) aTAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACat > 2:350471/1‑76 (MQ=255) tAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACata < 1:365498/76‑1 (MQ=255) aaCATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATAAACatat < 1:147799/76‑1 (MQ=255) aCATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACAtata < 2:273371/76‑1 (MQ=255) tGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTg < 1:306682/76‑1 (MQ=255) gACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGt > 1:393054/1‑76 (MQ=255) aCTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTGAATTTTAGATATACATATAACTTggt < 1:851821/76‑3 (MQ=255) gtgTTGAACATAACGCCGATAGNAAAAGGAGTTNTGTTCAACNATTTAATTTTCGATATACATATNACTTGTTCTa < 2:839999/74‑1 (MQ=255) ttGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATta < 1:303527/76‑1 (MQ=255) tAACGCCGATAGCAAAAGGAGTTTTGTTCAACATTTTAATTTTAGATATACATATAATTTGTGCTATTAATAAATc < 1:277370/76‑1 (MQ=255) aCGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCAc < 1:916979/76‑1 (MQ=255) gctgATCGCAGAAGGAGTGAGGAACTACACTTTAATATTAGATATACATATAACTTGTTCTATTAATAAATCACCt < 1:886241/73‑1 (MQ=255) cGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCg > 2:292209/1‑76 (MQ=255) aGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTAtt > 1:960528/1‑76 (MQ=255) cAAAAGGAGTTATGTTCAACAATTTAATTTTAGNGATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCt < 1:782072/76‑1 (MQ=255) cAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCt < 1:734776/76‑1 (MQ=255) aaaGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGa > 1:765979/1‑76 (MQ=255) aaaGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGa > 1:18864/1‑76 (MQ=255) aaaGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGa < 1:860251/76‑1 (MQ=255) aaaGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGa > 1:553699/1‑76 (MQ=255) aaGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGAc > 2:759160/1‑76 (MQ=255) aaGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGAc > 2:475832/1‑76 (MQ=255) ggAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTc < 1:797086/76‑1 (MQ=255) aGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGc > 1:431207/1‑76 (MQ=255) aTGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATCAATCACCTCGTATTCTGACTCGccccc > 1:580111/1‑76 (MQ=255) gTTCAACAATTTAATTCTAGATATACATATAACTCGTTCTATTNATAAGCCACGACGTGTANGGACTCACNCNCtn > 1:815450/1‑75 (MQ=255) tCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGgc < 2:458782/76‑1 (MQ=255) acaaTTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTNGCgca > 2:780913/1‑76 (MQ=255) tttaatttTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCaa > 2:696322/1‑76 (MQ=255) ttaatttTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCaaa < 2:140550/76‑1 (MQ=255) ttaatttTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCaaa < 2:966166/76‑1 (MQ=255) ttaattaTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCaaa > 1:146445/1‑76 (MQ=255) taatttTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCAAAg > 1:916901/1‑76 (MQ=255) aatttTAGATATACATATAACTTGTTCTATTAATAAATCACCGCGTATTCTGACTCGCCCCCTGGCGCAGCAAAGt > 1:769673/1‑76 (MQ=255) atttTAGATATACATATAACTTATTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCAAAGTc < 1:696322/76‑1 (MQ=255) ttttAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCAAAGTCa > 1:797942/1‑76 (MQ=255) tttAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTCACTCGCCCCCTGGCGCAGCAAAGTCAg > 1:570121/1‑76 (MQ=255) ttAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCAAAGTCAgg > 1:242502/1‑76 (MQ=255) tAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCAAAGTCAGGc > 1:790220/1‑76 (MQ=255) tAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCAAAGTCAGGc < 1:214284/76‑1 (MQ=255) | ATTATATTAAATAACATTTGACTGGGTTGAACATAACGCCGATAGCAAAAGGAGTTATGTTCAACAATTTAATTTTAGATATACATATAACTTGTTCTATTAATAAATCACCTCGTATTCTGACTCGCCCCCTGGCGCAGCAAAGTCAGGC > REL606/3222312‑3222462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |