Missing coverage evidence... | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|
seq id | start | end | size | ←reads | reads→ | gene | description | |||
* | * | ÷ | REL606 | 2032319–2032367 | 2055243 | 22877–22925 | 17 [16] | [16] 18 | [manB]–[cpsG] | [manB],manC,insB‑14,insA‑14,wbbD,wbbC,wzy,wbbB,wbbA,vioB,vioA,wzx,rmlC,rfbA,rfbD,rfbB,galF,wcaM,wcaL,wcaK,wzxC,wcaJ,[cpsG] |
GTCCACCACCGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACAGGTGATCAACGTAAGCGTCACGCAGA > REL606/2032243‑2032354 | gTCCACCACCGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGata > 1:1714403/1‑76 (MQ=255) tCCACCACCGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGatat > 2:865573/1‑76 (MQ=255) ccccaccGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATaa < 1:757997/74‑1 (MQ=255) accaccGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAAc > 2:1436053/1‑76 (MQ=255) ccccGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCg < 1:1405824/74‑1 (MQ=255) accGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGa > 2:1055069/1‑76 (MQ=255) accGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGGTTTTGACGTTGATATAACCGa > 2:753094/1‑76 (MQ=255) cGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAAc < 2:192514/76‑1 (MQ=255) cGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAAc > 2:892576/1‑76 (MQ=255) ggCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACa > 1:562738/1‑76 (MQ=255) cATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACAGGTGATCAACGTa < 2:596148/76‑1 (MQ=38) ttCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACAGGTGATCAACGTAAg < 1:205395/76‑1 (MQ=34) ggAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACAGGTGATCAACGTAAGCGTCa < 2:1680285/76‑1 (MQ=34) ggAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACAGGTGATCAACGTAAGCGTCa > 2:631495/1‑76 (MQ=34) ttAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACAGGTGATCAACGTAAGCGTCACGCa < 1:1005005/76‑1 (MQ=34) tAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACAGGTGATCAACGTAAGCGTCACGCAg > 1:332769/1‑76 (MQ=32) aaTCACCAGCTTGAGCGGCGTGAGGTTTTTCACGTTGATATAACCGAACAGGTGATCAACGTAAGCGTCACGCAga > 1:836839/1‑76 (MQ=14) | GTCCACCACCGGCCCCGCCGCGCCATTCCCGGAGTTAATCACCAGCTTGAGCGGCGTGAGGTTTTTGACGTTGATATAACCGAACAGGTGATCAACGTAAGCGTCACGCAGA > REL606/2032243‑2032354 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |