| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 768279 | 88 (1.560) | 4 (0.070) | 3/146 | 7.7 | 4.5% | intergenic (‑55/+147) | gpmA/galM | phosphoglyceromutase/galactose‑1‑epimerase (mutarotase) |
| ? | REL606 | = 768277 | 85 (1.550) | intergenic (‑53/+149) | gpmA/galM | phosphoglyceromutase/galactose‑1‑epimerase (mutarotase) | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ACCAGCTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAG > REL606/768205‑768354 | accagCTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGcga > 1:1054459/1‑76 (MQ=255) ccagCTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGcgac > 1:612313/1‑76 (MQ=255) agCTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGcgacga < 2:1537207/76‑1 (MQ=255) gCTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTTCCGCGACGaa < 2:1651603/76‑1 (MQ=255) gCTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGaa < 2:1563495/76‑1 (MQ=255) gCTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGaa < 1:128417/76‑1 (MQ=255) cTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAg < 2:974255/76‑1 (MQ=255) ttAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGc > 1:118471/1‑76 (MQ=255) aGTTATAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCaa < 1:253703/76‑1 (MQ=255) aGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCaa > 2:338192/1‑76 (MQ=255) aGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCaa > 2:1265967/1‑76 (MQ=255) gTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAAc < 2:721548/76‑1 (MQ=255) aGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCaa < 1:789228/76‑1 (MQ=255) gCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAAt > 1:1695651/1‑76 (MQ=255) ccATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATg > 1:1264308/1‑76 (MQ=255) ccATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATg < 1:928233/76‑1 (MQ=255) ccATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATg > 1:225582/1‑76 (MQ=255) atatACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCt < 2:1133147/76‑1 (MQ=255) tataCTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCtt < 2:1087584/76‑1 (MQ=255) tataCTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCtt < 2:1672965/76‑1 (MQ=255) tacttactCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTAc < 2:542094/76‑1 (MQ=255) acttactCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACg < 1:1342659/76‑1 (MQ=255) acttactCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACg > 1:1727/1‑76 (MQ=255) cttactCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGc < 1:663473/76‑1 (MQ=255) cttactCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGc < 1:1422890/76‑1 (MQ=255) tactCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCAt > 2:29964/1‑76 (MQ=255) cctcAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAAcc < 1:160286/76‑1 (MQ=255) tcAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCAt < 2:29404/76‑1 (MQ=255) tcAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCAt > 1:374190/1‑76 (MQ=255) cAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATa > 2:1091729/1‑76 (MQ=255) cAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATa < 1:615339/76‑1 (MQ=255) cAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATa > 1:1018401/1‑76 (MQ=255) cAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATa < 1:1050674/76‑1 (MQ=255) cAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATa < 2:970349/76‑1 (MQ=255) cAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATa > 1:369128/1‑76 (MQ=255) aaaTCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAg < 1:1372414/76‑1 (MQ=255) aaaTCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAg > 1:642881/1‑76 (MQ=255) catcTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGaa < 2:1104773/76‑1 (MQ=255) catcTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGaa > 1:890350/1‑76 (MQ=255) catcTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGaa < 1:652473/76‑1 (MQ=255) tcTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGaaaa > 1:434650/1‑76 (MQ=255) tcTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGaaaa < 1:19733/76‑1 (MQ=255) ttttAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATa < 1:1631055/76‑1 (MQ=255) ttttAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATa > 1:182325/1‑76 (MQ=255) tAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTg > 1:1327592/1‑76 (MQ=255) aaTGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTgg > 1:128907/1‑76 (MQ=255) aaTGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTgg > 1:1343149/1‑76 (MQ=255) gATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGgcgc < 2:1490273/76‑1 (MQ=255) gATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGgcgc > 1:1031054/1‑76 (MQ=255) ataataATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCa > 2:740960/1‑76 (MQ=255) ataataATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCa > 1:1202203/1‑76 (MQ=255) aataatTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAgt > 1:1267894/1‑76 (MQ=255) taatTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAgtgt > 1:1575302/1‑76 (MQ=255) aatTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTa > 1:1106636/1‑76 (MQ=255) aatTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTa < 2:1704610/76‑1 (MQ=255) aatTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTa < 1:286628/76‑1 (MQ=255) aatTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTa < 1:277506/76‑1 (MQ=255) atTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTaa > 2:997488/1‑76 (MQ=255) atTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTaa < 1:1091198/76‑1 (MQ=255) atTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTaa < 1:1679497/76‑1 (MQ=255) tctcATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAgg < 1:354264/76‑1 (MQ=255) cATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttg > 1:761173/1‑76 (MQ=255) cATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttg < 1:1062292/76‑1 (MQ=255) cATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttg > 1:288995/1‑76 (MQ=255) cATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttg > 1:804018/1‑76 (MQ=255) ttATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGgttgtt > 1:398839/1‑76 (MQ=255) tataTTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGttgttg < 1:1518267/76‑1 (MQ=255) atatTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTtgttgt > 1:893122/1‑76 (MQ=255) tatTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTtgtg < 1:711499/76‑1 (MQ=255) tatTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTtgtg < 2:729940/76‑1 (MQ=255) tatTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTtgtg < 1:1746977/76‑1 (MQ=255) tatTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTtgtg < 1:232964/76‑1 (MQ=255) atTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGa < 2:1694438/76‑1 (MQ=255) atTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGa < 2:931955/76‑1 (MQ=255) atTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGa > 1:1153612/1‑76 (MQ=255) atTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGa > 2:664997/1‑76 (MQ=255) ttGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGaa > 1:369710/1‑76 (MQ=255) ttGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGaa < 2:158089/76‑1 (MQ=255) tGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAat < 2:211529/76‑1 (MQ=255) tGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAat > 1:871133/1‑76 (MQ=255) gCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAata < 1:1375252/76‑1 (MQ=255) gCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAata < 2:328596/76‑1 (MQ=255) ccGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAatat < 1:382523/76‑1 (MQ=255) cgcgACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATAtt < 2:1079818/76‑1 (MQ=255) cgcgACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATAtt < 1:436349/76‑1 (MQ=255) cgacgaAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa < 2:1253497/76‑1 (MQ=255) cgacgaAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGa > 2:1433087/1‑76 (MQ=255) gacgaAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAg < 2:520930/76‑1 (MQ=255) | ACCAGCTTAGTTACAGCCATATACTTACTCCTCAAATCATCTTTTAATGATAATAATTCTCATTATATTGCCGCGACGAAGCAACAGCAATGCTTACGCATAACCATAGCGAAAATAGTGGCGCAGTGTAAGGTTGTTGTGAATATTGAG > REL606/768205‑768354 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |