| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC | REL606 | 1,609,175 | Δ7,554 bp | between IS3 | ybcW–[ECB_01526] | ybcW, gnsB, ynfN, ECB_01516, cspI, ydfP, ydfQ, ydfR, essQ, ECB_01522, ECB_01523, insE‑4, insF‑4, [ECB_01526] |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 1607964–1609175 | 1616671–1615471 | 6297–8708 | 18 [16] | [15] 17 | insE‑3–[insF‑4] | insE‑3,insF‑3,ybcW,gnsB,ynfN,ECB_01516,cspI,ydfP,ydfQ,ydfR,essQ,ECB_01522,ECB_01523,insE‑4,[insF‑4] |
AAGATGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAA > REL606/1607888‑1607989 | aaGATGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGGGGAAActct > 2:599269/1‑76 (MQ=255)aaGATGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAActct < 1:241660/76‑1 (MQ=255) aTGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcag > 2:396636/1‑76 (MQ=255) tGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGGAAACTCtcagt > 2:561081/1‑76 (MQ=255) gcggcgTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCtcagtc < 1:20676/76‑1 (MQ=255) cggcgTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAATGAGGAAAATCtcaggca > 2:720960/1‑76 (MQ=18) ggCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTg < 1:578085/76‑1 (MQ=255) ggCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTg > 2:1639342/1‑76 (MQ=255) gCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGa < 2:1225465/76‑1 (MQ=255) cGGTTATCTGAAAATTGATCTTACACAGCAATAGTGGACACGCGGCTAAGCGAGTAAACTCTCAGTCAGAGGTGAc > 2:1469872/1‑76 (MQ=17) ggTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACt < 1:830749/76‑1 (MQ=255) ttATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTca > 2:772821/1‑76 (MQ=255) cTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATg > 1:1405731/1‑76 (MQ=38) cTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATg < 2:825939/76‑1 (MQ=38) cTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATg > 1:1537277/1‑76 (MQ=38) aaaTTGATCTTACCCAGCAATAGTGGACAGGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaa < 2:294816/76‑1 (MQ=17) aaaTTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaa > 2:953609/1‑76 (MQ=32) aaTTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACaaa < 1:1014841/76‑1 (MQ=31) | AAGATGCGGCGTGGCGGTTATCTGAAAATTGATCTTACCCAGCAATAGTGGACACGCGGCTAAGTGAGTAAACTCTCAGTCAGAGGTGACTCACATGACAAA > REL606/1607888‑1607989 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |