| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 3,912,149 | Δ15 bp | coding (28‑42/99 nt) | ilvL → | ilvG operon leader peptide |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3912148 | 1 (0.010) | 60 (0.960) | 44/132 | 0.3 | 98.5% | coding (27/99 nt) | ilvL | ilvG operon leader peptide |
| ? | REL606 | 3912164 = | 1 (0.020) | coding (43/99 nt) | ilvL | ilvG operon leader peptide | |||||
ATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGA > REL606/3912073‑3912223 | aTGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGC > 2:1018658‑M1/1‑76 (MQ=255)aTGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGC > 1:1878633‑M1/1‑76 (MQ=255) tGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCg < 1:69621‑M1/76‑2 (MQ=255) gTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtg > 1:936462‑M1/1‑73 (MQ=255) tctTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACCGCCCTTCTACGAGTGATTAGCgtggtggt > 2:368496‑M1/1‑68 (MQ=255) tctTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggt > 2:368519‑M1/1‑68 (MQ=255) ctTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtg < 1:1445114‑M1/76‑10 (MQ=255) tttAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtga > 1:353748‑M1/1‑66 (MQ=255) ttAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgat > 1:1613791‑M1/1‑65 (MQ=255) tAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgatt > 1:861923‑M1/1‑64 (MQ=255) tAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgatt > 2:2196312‑M1/1‑64 (MQ=255) aGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgatta > 1:1472279‑M1/1‑63 (MQ=255) gCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattatt < 2:848138‑M1/76‑16 (MQ=255) gCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattatt > 2:2157401‑M1/1‑61 (MQ=255) gCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattatt < 2:848109‑M1/76‑16 (MQ=255) aTTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattat > 1:884623‑M1/1‑59 (MQ=255) aTTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattat < 2:1903492‑M1/76‑18 (MQ=255) aTTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattat > 1:29274‑M1/1‑59 (MQ=255) ttCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccac < 2:740915‑M1/76‑23 (MQ=255) tCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccacc > 1:1857717‑M1/1‑53 (MQ=255) gAACAAGATGCAAGAAAAGACATAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgt < 1:352478‑M1/76‑26 (MQ=255) aaCAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtg > 1:2154712‑M1/1‑50 (MQ=255) aaCAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtg > 1:301585‑M1/1‑50 (MQ=255) aCAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgc > 1:362335‑M1/1‑49 (MQ=255) cAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcg > 2:468731‑M1/1‑48 (MQ=255) aaGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcgg < 1:1448339‑M1/76‑30 (MQ=255) aaGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcgg > 2:737454‑M1/1‑47 (MQ=255) aGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggg > 2:21868‑M1/1‑46 (MQ=255) aTGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggc > 2:2031337‑M1/1‑44 (MQ=255) tGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggct > 2:2050944‑M1/1‑43 (MQ=255) gCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATtattattc < 1:1889785/76‑3 (MQ=255) cAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgc > 1:1728814‑M1/1‑41 (MQ=255) cAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgc > 1:1110067‑M1/1‑41 (MQ=255) aaGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgca > 2:75029‑M1/1‑40 (MQ=255) aaGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgca > 2:825157‑M1/1‑40 (MQ=255) cAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacga > 2:2184062‑M1/1‑31 (MQ=255) cAAAATGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacga < 2:1988267‑M1/76‑46 (MQ=255) aaaaTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccntgcggggctgcacttggacgag < 2:300126‑M1/76‑47 (MQ=255) aaaaTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgag > 2:1077573‑M1/1‑30 (MQ=255) aaaTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgagg < 1:1931404‑M1/76‑48 (MQ=255) aaaTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgagg < 1:11695‑M1/76‑48 (MQ=255) aTGACAGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaa < 2:973124‑M1/76‑50 (MQ=255) aGCCCTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggct > 2:965332‑M1/1‑22 (MQ=255) cccTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggctta < 2:465092‑M1/76‑57 (MQ=255) ccTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttag < 1:602526‑M1/76‑58 (MQ=255) cTTCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttaga > 1:1756196‑M1/1‑18 (MQ=255) ttCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagag > 1:170801‑M1/1‑17 (MQ=255) tCTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagaga < 2:387984‑M1/76‑61 (MQ=255) cTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagat < 2:2114010‑M1/76‑62 (MQ=255) cTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagat > 1:602444‑M1/1‑15 (MQ=255) cTACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagat < 2:1596710‑M1/76‑62 (MQ=255) tACGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatc < 1:533380‑M1/76‑63 (MQ=255) aCGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatca > 2:243041‑M1/1‑13 (MQ=255) aCGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatca < 1:1589715‑M1/76‑64 (MQ=255) aCGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatca < 1:847073‑M1/76‑64 (MQ=255) cGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaa < 2:938443‑M1/76‑65 (MQ=255) cGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaa < 1:1077573‑M1/76‑65 (MQ=255) cGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaa < 1:627801‑M1/76‑65 (MQ=255) cGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaa < 1:1295008‑M1/76‑65 (MQ=255) cGAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaa < 2:1024981‑M1/76‑65 (MQ=255) gAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaag < 1:820674‑M1/76‑66 (MQ=255) gAGTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaag < 1:820701‑M1/76‑66 (MQ=255) gAGGGATTGGCgtggggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagc < 2:155516‑M1/76‑66 (MQ=255) gTGATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttgtacgaggaaaggcttagagatcaagcc < 2:1268059‑M1/76‑68 (MQ=255) tGATTAGCgtggtggtgattattagcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagcct < 1:2199610‑M1/76‑69 (MQ=255) gATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagcctt > 1:2039916‑M1/1‑7 (MQ=255) gATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagcctt > 1:1335754‑M1/1‑7 (MQ=255) gATTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagcctt > 1:775256‑M1/1‑7 (MQ=255) aTTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagcctta < 1:1894770‑M1/76‑71 (MQ=255) aTTAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagcctta < 1:1042970‑M1/76‑71 (MQ=255) ttAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagccttaa < 2:1756196‑M1/76‑72 (MQ=255) tAGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagccttaac > 1:918201‑M1/1‑4 (MQ=255) aGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagccttaacg < 2:58585‑M1/76‑74 (MQ=255) aGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagccttaacg < 2:702737‑M1/76‑74 (MQ=255) aGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagccttaacg < 2:861923‑M1/76‑74 (MQ=255) aGCgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagccttaacg < 1:782505‑M1/76‑74 (MQ=255) cgtggtggtgattattatcccaccgtgcggggctgcacttggacgaggaaaggcttagagatcaagccttaacgaa < 1:1719411‑M1/76‑76 (MQ=255) | ATGGTAACTCTTTAGGCATTCCTTCGAACAAGATGCAAGAAAAGACAAAATGACAGCCCTTCTACGAGTGATTAGCCTGGTCGTGATTAGCGTGGTGGTGATTATTATCCCACCGTGCGGGGCTGCACTTGGACGAGGAAAGGCTTAGAGA > REL606/3912073‑3912223 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |