| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3564938 = | 121 (1.730) | 3 (0.050) | 3/136 | 8.1 | 2.6% | coding (210/1608 nt) | yhiKL | hypothetical protein |
| ? | REL606 | 3565315 = | 111 (1.750) | intergenic (‑168/‑215) | yhiKL/yhiM | hypothetical protein/conserved inner membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGATAAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3565019‑3564938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaagATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAACGCT > REL606/3565315‑3565387 TGATAAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCAC > 2:1852918/1‑76 ATAAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTG > 2:492630/1‑76 TAAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGG > 2:607184/1‑76 TAAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGG > 2:137464/1‑76 AAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGA > 1:2079894/1‑76 AAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGA > 2:2169528/1‑76 AACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGAA < 2:78968/76‑1 AACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGAA < 1:952095/76‑1 ACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGAAG < 1:1047215/76‑1 CATCTATTTCCTGCAACATGGTCACTGGAAGATAATTGTAAAAAACAAGAGCATAAGAATTAATCTTAGGATAAAT < 2:974212/76‑1 TTTCCTGCAACATGGTCACTGGAAGATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTAT < 2:778077/76‑1 GCAACAGGGTCACGGGAAGGTAATTGAAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCA < 2:1741502/76‑1 CTGGAAGATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAA < 1:968624/76‑1 GGAAGATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAACG > 2:1674711/1‑76 GGAAGATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAACG > 1:1442341/1‑76 GGAAGATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAACG > 1:1442329/1‑76 AAGATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAACGCT > 2:2093316/1‑76 AAGATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAACGCT < 2:1206893/76‑1 AAGATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAACGCT > 2:1078781/1‑76 TGATAAACTGGATAATGATTCGCAAATAGATAACGATTTTGGCCTGCATATCATCTATTTCCTGCAACATGGTCACTGGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < REL606/3565019‑3564938‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaagATAATTGTAAAAAACAACAGCATAAGAATTAATCTTAGGATAAATTTTTATTTATCATGGCCTTTTGAACGCT > REL606/3565315‑3565387 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |