| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 3180864 = | 91 (1.300) | 6 (0.090) | 6/136 | 6.5 | 6.5% | coding (58/663 nt) | yqjA | conserved inner membrane protein |
| ? | REL606 | 3180885 = | 89 (1.400) | coding (79/663 nt) | yqjA | conserved inner membrane protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACA > REL606/3180811‑3180960 | aaCTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAt < 2:1716454/76‑1 (MQ=255)aaCTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAt < 2:686757/76‑1 (MQ=255)aaCTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAt < 2:1285596/76‑1 (MQ=255) aCTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtg > 1:1983501/1‑76 (MQ=255) cTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtgt > 2:2176134/1‑76 (MQ=255) cTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtgt < 2:1870656/76‑1 (MQ=255) ttttGTCCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtgtt < 2:2245267/76‑1 (MQ=255) ttttGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCCATCCATCGATGATTGGCAtgtt > 1:97926/1‑76 (MQ=255) ttttGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtgtt < 2:2245285/76‑1 (MQ=255) ttttGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtgtt < 2:1357824/76‑1 (MQ=255) tttGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCAtgttg < 1:1885359/76‑1 (MQ=255) tGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTNTa < 2:1582294/76‑1 (MQ=255) tGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTa < 2:548485/76‑1 (MQ=255) gACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAt < 1:1292687/76‑1 (MQ=255) gACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAt < 2:2057503/76‑1 (MQ=255) gACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAt > 1:103997/1‑76 (MQ=255) aCCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAtt > 2:2126885/1‑76 (MQ=255) aCCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAtt < 2:206126/76‑1 (MQ=255) aCCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAtt > 1:180194/1‑76 (MQ=255) cccAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAttt < 1:2249994/76‑1 (MQ=255) cccAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAttt < 1:1889378/76‑1 (MQ=255) ccAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAtttt < 2:254883/76‑1 (MQ=255) ccAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAtttt < 2:1239927/76‑1 (MQ=255) ccAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAtttt < 2:567236/76‑1 (MQ=255) ccAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTAtttt < 2:1991701/76‑1 (MQ=255) cAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTg < 1:1989743/76‑1 (MQ=255) cAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTg < 2:1223151/76‑1 (MQ=255) ttGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCt > 2:1939357/1‑76 (MQ=255) gctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttg > 2:1546840/1‑76 (MQ=255) gctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttg < 2:1506086/76‑1 (MQ=255) gctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttg > 1:543482/1‑76 (MQ=255) gctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttg < 2:2155274/76‑1 (MQ=255) ctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATtttgttttgt > 1:251360/1‑76 (MQ=255) ctgcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgt > 1:219248/1‑76 (MQ=255) gcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgttt < 1:2079630/76‑1 (MQ=255) gcAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgttt > 2:1077677/1‑76 (MQ=255) cAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttttttg < 2:1771436/76‑1 (MQ=255) cAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgtttg < 1:744700/76‑1 (MQ=255) cAAGCCCGGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgtttg < 1:814083/76‑1 (MQ=255) aaGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCttgtttgt < 1:809178/76‑1 (MQ=255) aGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTa < 2:2146471/76‑1 (MQ=255) gCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTCTTTTGTCTTGTTTGTac > 2:904701/1‑75 (MQ=255) acccTGGGGGCCCCGGATTTAGACCCGCCGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTaa < 2:776337/75‑1 (MQ=255) cccTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAt < 2:274835/76‑1 (MQ=255) cTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAAttt < 2:377005/76‑1 (MQ=255) gggCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGtt > 1:369041/1‑76 (MQ=255) gcgcAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTcc < 1:2235528/76‑1 (MQ=255) gcgcAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTcc > 1:1417492/1‑76 (MQ=255) cgcAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCt < 1:790480/76‑1 (MQ=255) cgcAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCt < 2:1601075/76‑1 (MQ=255) gcAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCtt < 2:1864046/76‑1 (MQ=255) cAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTTCTTg > 2:613351/1‑76 (MQ=255) cAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTg > 1:957635/1‑76 (MQ=255) cAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTg < 2:1754745/76‑1 (MQ=255) ggATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaa < 1:1616929/76‑1 (MQ=255) aTTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGaaaa < 1:676327/76‑1 (MQ=255) ttttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTGCTTGAAAAc < 2:167965/76‑1 (MQ=255) ttttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAAc < 2:2194960/76‑1 (MQ=255) tttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACg < 1:435594/76‑1 (MQ=255) tttGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACg < 1:931210/76‑1 (MQ=255) tGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgc > 1:1479561/1‑76 (MQ=255) gAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgct > 2:166113/1‑76 (MQ=255) gAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgct > 2:1517983/1‑76 (MQ=255) aaaCCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgctt < 2:782841/76‑1 (MQ=255) aaaCCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgctt < 2:2003063/76‑1 (MQ=255) aaaCCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgctt < 2:1910908/76‑1 (MQ=255) aaCCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttg > 1:556491/1‑76 (MQ=255) aaCCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttg < 2:235442/76‑1 (MQ=255) aCCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgc < 1:883034/76‑1 (MQ=255) aCCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgc > 1:1640122/1‑76 (MQ=255) ccTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgctt < 2:1361221/76‑1 (MQ=255) ccTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgctt < 1:1227592/76‑1 (MQ=255) ccTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgctt < 2:134726/76‑1 (MQ=255) ccTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgcttgctt > 1:53028/1‑76 (MQ=255) ccTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTCTGTTCCTTGAAAACGgcttgctt < 2:685287/76‑1 (MQ=255) tGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGgctttctttc > 2:405952/1‑74 (MQ=255) cAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggcg > 2:1066415/1‑76 (MQ=255) cAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggcg > 2:548821/1‑76 (MQ=255) aaTCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCcggcgg > 2:490035/1‑76 (MQ=255) tCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGcc > 1:1696995/1‑76 (MQ=255) ccATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCt > 2:2087313/1‑76 (MQ=255) cATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtt > 2:118164/1‑76 (MQ=255) cATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtt < 1:748505/76‑1 (MQ=255) cATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtt < 1:796807/76‑1 (MQ=255) aTCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttt < 2:1781149/76‑1 (MQ=255) tCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtttt < 2:1576482/76‑1 (MQ=255) tCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCtttt < 2:1218835/76‑1 (MQ=255) cGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCttttt < 2:1740645/76‑1 (MQ=255) atgatTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTAc < 2:464266/76‑1 (MQ=255) gatTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCg > 2:1519515/1‑76 (MQ=255) gatTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCg > 2:1670854/1‑76 (MQ=255) gatTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCg > 1:825809/1‑76 (MQ=255) atTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCgg > 2:1440099/1‑76 (MQ=255) ttGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCggg < 1:384039/76‑1 (MQ=255) tGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGc < 2:2009977/76‑1 (MQ=255) gCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGa < 2:998885/76‑1 (MQ=255) gCATGTTGTATTTTGTCTTGGTTGTAATTTTGTTCCTTGAAACCGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGa < 2:573119/76‑1 (MQ=255) cATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGAc > 2:2137397/1‑76 (MQ=255) cATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGAc > 1:390648/1‑76 (MQ=255) aTGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACa > 2:2227423/1‑76 (MQ=255) | AACTTTTGACCCAATTGCTGCAAGCCCTGTGGGCGCAGGATTTTGAAACCCTGGCCAATCCATCGATGATTGGCATGTTGTATTTTGTCTTGTTTGTAATTTTGTTCCTTGAAAACGGCTTGCTTCCGGCGGCCTTTTTACCGGGCGACA > REL606/3180811‑3180960 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |