| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | 2038725 = | 52 (0.800) | 3 (0.050) | 3/138 | 8.3 | 7.2% | coding (224/822 nt) | wbbB | putative glycosyltransferase WbbB |
| ? | REL606 | 2039200 = | 30 (0.500) | coding (495/747 nt) | wbbA | putative glycosyltransferase WbbA | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCTTC > REL606/2038651‑2038799 | cATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaa > 1:1042662/1‑76 (MQ=255)cATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaa > 1:1042636/1‑76 (MQ=255)cATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaa > 2:1125624/1‑76 (MQ=255)cATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaa > 2:1336460/1‑76 (MQ=255) ttATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaaaa < 1:76217/76‑1 (MQ=255) ttATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaaaa < 1:525907/76‑1 (MQ=255) ttATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaaaa > 2:1510164/1‑76 (MQ=255) tATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTaaaaa > 2:1406863/1‑76 (MQ=255) tGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAAt > 2:531020/1‑76 (MQ=255) tGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAAt < 1:1823309/76‑1 (MQ=255) gTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATc > 1:269441/1‑76 (MQ=255) ttCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCtg < 2:105648/76‑2 (MQ=255) tCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTAt < 1:1649047/76‑1 (MQ=255) aaGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTAttc > 1:1053628/1‑76 (MQ=255) tGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTta > 1:1620445/1‑76 (MQ=255) tGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTta > 1:557281/1‑76 (MQ=255) aTCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAg < 2:772975/76‑1 (MQ=255) ttCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAg < 1:1731348/76‑1 (MQ=255) ttCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAg < 1:445847/76‑1 (MQ=255) ttCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAg > 1:717033/1‑76 (MQ=255) ttCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCGTCTAAAAAATCTATTCCTTCCTTATAGGCAg < 1:438512/76‑1 (MQ=255) cAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGaa > 1:1909574/1‑76 (MQ=255) aaaaTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGaaa > 1:1838111/1‑76 (MQ=255) aaTGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAAc < 2:868914/76‑1 (MQ=255) tGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCGTTCCTTATAGGCAGAAAACTc > 2:1235012/1‑76 (MQ=255) tGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTc > 2:1932572/1‑76 (MQ=255) tGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTc > 2:949330/1‑76 (MQ=255) agaATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCaa > 2:804231/1‑76 (MQ=255) agaATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCaa > 2:804213/1‑76 (MQ=255) cTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAAtt < 1:155994/76‑1 (MQ=255) tCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAAttt < 2:2050199/76‑1 (MQ=255) tCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAAttt < 1:1600376/76‑1 (MQ=255) tGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTc < 1:1303917/76‑1 (MQ=255) aTGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTccc < 2:22793/76‑1 (MQ=255) gTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGtt > 1:495397/1‑76 (MQ=255) gTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGtt < 2:2020258/76‑1 (MQ=255) taatGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCg < 2:178069/76‑1 (MQ=255) atGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGat > 1:1975523/1‑76 (MQ=255) atGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGat > 2:1135850/1‑76 (MQ=255) tGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGata > 2:503229/1‑76 (MQ=255) aGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATg < 1:2013385/76‑1 (MQ=255) cTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGaa > 2:1745199/1‑76 (MQ=255) aTCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAAt > 2:1699695/1‑76 (MQ=255) aTCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAAt > 2:1599168/1‑76 (MQ=255) aTCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAAt > 2:157791/1‑76 (MQ=255) aTCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAAt < 1:1458128/76‑1 (MQ=255) aTCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAAt > 1:1395127/1‑76 (MQ=255) tcttctAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATc < 1:1280224/76‑1 (MQ=255) cttctAAAAAAGCTATTCCTTCCTTATAGGCAAAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATcc < 1:427820/76‑1 (MQ=255) ttctAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATccc < 2:772407/76‑1 (MQ=255) ctAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCtt < 2:122299/76‑1 (MQ=255) tAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCTTc < 1:808968/76‑1 (MQ=255) | CATTATGTTTCAAGAACAATGTATCATTCAAAATGAGAATTGGTACTCCTGATGGTAATAATGAGCTATCTTCTAAAAAATCTATTCCTTCCTTATAGGCAGAAAACTCAAAAAGAGAATTTGTCCCGTTTTCGATATGAAATCCCTTC > REL606/2038651‑2038799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |