New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	= 2039252	33 (0.510)	7 (0.120)	5/140	7.2	15.3%	coding (443/747 nt)	wbbA	putative glycosyltransferase WbbA
	?	REL606	= 2039725	47 (0.770)					coding (404/438 nt)	vioB	VioB, involved in dTDP‑N‑acetylviosamine synthesis
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACATTTACCGTAAAA  >  REL606/2039651‑2039799                                                                           |                                                                           gTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATAc                                                                           >  1:776244/1‑76 (MQ=255)   ccGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAg                                                                         <  2:1280590/76‑1 (MQ=255)     gACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGAt                                                                       >  1:1946712/1‑76 (MQ=255)       cTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTc                                                                     >  1:499254/1‑76 (MQ=255)           tatCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGc                                                                 >  1:961387/1‑76 (MQ=255)                gTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCaa                                                            >  2:1544171/1‑76 (MQ=255)                gTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCaa                                                            <  2:141666/76‑1 (MQ=255)                gTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCaa                                                            >  2:1079477/1‑76 (MQ=255)                gTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATCCAAGCTCCaa                                                            >  2:1544187/1‑76 (MQ=255)                     ccGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAAtt                                                       <  1:445037/76‑1 (MQ=255)                     ccGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAAtt                                                       >  1:2052322/1‑76 (MQ=255)                       gAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTc                                                     >  1:1204993/1‑76 (MQ=255)                         aaataaatATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCtt                                                   >  1:1218942/1‑76 (MQ=255)                             aaataTGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGctt                                               >  2:211356/1‑76 (MQ=255)                                tatGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGcttctt                                            <  1:458402/76‑1 (MQ=255)                                tatGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGcttctt                                            <  1:458375/76‑1 (MQ=255)                                   gAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCa                                         <  1:610264/76‑1 (MQ=255)                                   gAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCa                                         <  1:610283/76‑1 (MQ=255)                                    gttCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAg                                        >  2:1771844/3‑76 (MQ=255)                                     aTCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGa                                       >  2:690297/1‑76 (MQ=255)                                      tCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATAGAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGat                                      >  2:1258140/1‑76 (MQ=255)                                       cTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGata                                     >  1:6581/1‑76 (MQ=255)                                        ttCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGatat                                    <  2:169389/76‑1 (MQ=255)                                        ttCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGatat                                    <  1:1735136/76‑1 (MQ=255)                                         tCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATAtt                                   <  2:915375/76‑1 (MQ=255)                                         tCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATAtt                                   >  2:1247175/1‑76 (MQ=255)                                         tCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATAtt                                   <  2:1929883/76‑1 (MQ=255)                                         tCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATAtt                                   <  1:1761308/76‑1 (MQ=255)                                            caGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGt                                >  1:393800/1‑76 (MQ=255)                                              gATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGttt                              >  1:1466886/1‑76 (MQ=255)                                                ttATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAg                            >  1:1586440/1‑76 (MQ=255)                                                ttATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAg                            >  1:1586413/1‑76 (MQ=255)                                                 tATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGc                           >  1:1825625/1‑76 (MQ=255)                                                 tATCTCCAATAGCGCTTGGGTTAAATACAGATTCAAGCCCCCAAAAATTTTTTCTTTTTTCTGCTAATGttttttc                           >  1:28159/1‑73 (MQ=255)                                                  aTCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCt                          >  1:528251/1‑76 (MQ=255)                                                    cttcAAAAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTgg                        >  2:294472/4‑76 (MQ=255)                                                     tcCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGt                       <  2:1532205/76‑1 (MQ=255)                                                     tcCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGt                       <  2:1532227/76‑1 (MQ=255)                                                      ccAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGta                      <  2:370828/76‑1 (MQ=255)                                                      ccAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGta                      >  2:139886/1‑76 (MQ=255)                                                        aaTAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGtata                    >  2:996867/1‑76 (MQ=255)                                                               cTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACAt             <  1:535847/76‑1 (MQ=255)                                                                ttGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACAtt            <  1:2023311/76‑1 (MQ=255)                                                                ttGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACAtt            <  1:2023321/76‑1 (MQ=255)                                                                 tGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACAttt           <  1:1014897/76‑1 (MQ=255)                                                                  ggTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATAATGGTTTAGCTGGTATACCTACATTTa          >  1:804887/1‑76 (MQ=255)                                                                   gTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACATTTAc         >  1:526479/1‑76 (MQ=255)                                                                      tAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACATTTACCGt      <  2:9410/76‑1 (MQ=255)                                                                        aaTACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACATTTACCGTaa    <  1:1337708/76‑1 (MQ=255)                                                                          tACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACATTTACCGTaaaa  <  1:1680795/76‑1 (MQ=255)                                                                           |                                                                           GTCCGACTAATATCCGTATGCCGAAAATAAATATGAATCTTCACAGATTATCTCCAATAGCGCTTGGTTTAAATACAGATTCAAGCTCCAATAATTTCTTGCTTCTTTCAGATATTGGTTTAGCTGGTATACCTACATTTACCGTAAAA  >  REL606/2039651‑2039799

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.