New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	REL606	= 2039934	60 (1.020)	3 (0.060)	3/134	6.2	5.9%	coding (195/438 nt)	vioB	VioB, involved in dTDP‑N‑acetylviosamine synthesis
	?	REL606	= 2040066	43 (0.820)					coding (63/438 nt)	vioB	VioB, involved in dTDP‑N‑acetylviosamine synthesis
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTAAAATAACATCCGGAAGAACAATACTTCCGCAACCTATGATAACATGTTTGCCTATAAATACAGTACCGCTATGTATATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2039852‑2039934 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtatattcTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATATTCC  <  REL606/2040066‑2039994                                                                                                                                                              GTAAAATAACATCCGGAAGAACAATACTTCCGCAACCTATGATAACATGTTTGCCTATAAATACAGTACCGCTATG                                                                                  >  1:717965/1‑76   AAAATAACATCCGGAAGAACAATACTTCCGCAACCTATGATAACATGTTTGCCTATAAATACAGTACCGCTATGTA                                                                                >  2:470569/1‑76    AAATAACATCCGGAAGAACAATACTTCCGCAACCTATGATAACATGTTTGCCTATAAATACAGTACCGCTATGTAT                                                                               >  2:1846840/1‑76     AATAACATCCGGAAGAACAATACTTCCGCAACCTATGATAACATGTTTGCCTATAAATACAGTACCGCTATGTATA                                                                              >  2:792493/1‑76      ATAACATCCGGAAGAACAATACTTCCGCAACCTATGATAACATGTTTGCCTATAAATACAGTACCGCTATGTAGAT                                                                             <  2:1691834/76‑1                                      TATGATAACATGTTTGCCTATAAATACAGTACCGCTATGTATATTCTTCAATTATTGGCAAAGGAAAAGTAACTAT                                             >  2:367079/1‑76                                                       CTATAAATACAGTACCGCTATGTATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACA                            >  2:188272/1‑76                                                                   TACCGCTATGTATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAG                >  2:1238524/1‑76                                                                            GTATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATAT       >  1:776956/1‑76                                                                             TATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATA      <  1:788299/76‑1                                                                             TATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATA      <  2:103082/76‑1                                                                             TATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATA      <  2:1338715/76‑1                                                                              ATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATgc     <  2:1032305/76‑3                                                                              ATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATgc     <  2:1032293/76‑3                                                                              ATATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATgc     <  2:1032278/76‑3                                                                               TATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATATT    <  1:892019/76‑1                                                                                ATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATATTC   >  2:323623/1‑76                                                                                ATTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATATTC   >  1:1396147/1‑76                                                                                 TTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATATTCC  <  1:1127748/76‑1                                                                                 TTCTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATATTCC  >  1:1720723/1‑76                                                                                                                                                              GTAAAATAACATCCGGAAGAACAATACTTCCGCAACCTATGATAACATGTTTGCCTATAAATACAGTACCGCTATGTATATTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  REL606/2039852‑2039934 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtatattcTTCAATTATTGGCAAAGGAAAAGTAACTATATCTGACTACGCAAACATTTCATCTCGAGTCTCAATATATTCC  <  REL606/2040066‑2039994

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.