| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC | REL606 | 1,476,358 | Δ13 bp | coding (77‑89/537 nt) | ydcN → | predicted DNA‑binding transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 1476357 | 2 (0.030) | 48 (0.760) | 38/140 | 0.6 | 96.1% | coding (76/537 nt) | ydcN | predicted DNA‑binding transcriptional regulator |
| ? | REL606 | 1476371 = | 2 (0.030) | coding (90/537 nt) | ydcN | predicted DNA‑binding transcriptional regulator | |||||
CGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAAT > REL606/1476297‑1476445 | ggaaaatctcgctcgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacgg > 1:1536097‑M2/75‑76 (MQ=255)ggaaaatctcgctcgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgagacgg > 2:359709‑M2/75‑76 (MQ=255)ggaaaatctcgctcgctttttatccaccacacttaaacaactacgccagcagcgcggctggaggctttcgcgacgg > 2:474434‑M2/75‑76 (MQ=255) aaaatctcgctcgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGc > 1:966492‑M2/73‑76 (MQ=255) cgctcgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTa > 1:1663615‑M2/66‑76 (MQ=255) gctcgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTaa > 1:1154413‑M2/65‑76 (MQ=255) tcgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAg < 1:542931‑M2/14‑1 (MQ=255) cgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGc > 2:727852‑M2/62‑76 (MQ=255) cgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGc < 1:580892‑M2/15‑1 (MQ=255) cgctttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGGTTCTAAAGc > 2:1204287‑M2/62‑76 (MQ=255) tttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAAt < 2:2075743‑M2/18‑1 (MQ=255) tttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAAt > 1:1434125‑M2/59‑76 (MQ=255) ttttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATg > 2:484261‑M2/58‑76 (MQ=255) ttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGtt < 2:559515‑M2/21‑1 (MQ=255) ttatccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGtt < 2:1757054‑M2/21‑1 (MQ=255) atccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAg < 1:326951‑M2/23‑1 (MQ=255) atccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAg > 2:2064184‑M2/54‑76 (MQ=255) tccaccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAgg < 2:2023886‑M2/24‑1 (MQ=255) ccacacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAg > 2:1252100‑M2/49‑76 (MQ=255) cacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGAtt > 1:555666‑M2/46‑76 (MQ=255) cacttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGAtt < 2:609323‑M2/31‑1 (MQ=255) acttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTg > 1:1271636‑M2/45‑76 (MQ=255) acttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTg < 1:2070850‑M2/32‑1 (MQ=255) acttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTg < 2:1239632‑M2/32‑1 (MQ=255) acttaaacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTg < 2:442960‑M2/32‑1 (MQ=255) ccAGCAGCGCGGCTGGTGACTTTCGCGACTAGCAGCAGCGACGGGAGCTCCTAGATCAGTGCACTGGCAGATTGAg > 2:1637579/1‑76 (MQ=255) taaacaactacgccagcagcgcggctggagtctttcgcgacGGGCCTTTCCAAAGCAATGATAGGGCAGATTGAGc > 2:598143‑M2/42‑76 (MQ=255) aacaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGt > 2:625307‑M2/40‑76 (MQ=255) acaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTa > 2:1095931‑M2/39‑76 (MQ=255) acaactacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTa > 1:1663309‑M2/39‑76 (MQ=255) ctacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGa > 1:124588‑M2/35‑76 (MQ=255) ctacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGa > 2:188651‑M2/35‑76 (MQ=255) tacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGag < 2:543692‑M2/43‑1 (MQ=255) tacgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGag > 2:193378‑M2/34‑76 (MQ=255) acgccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGagt > 2:1511181‑M2/33‑76 (MQ=255) gccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGagtcc < 1:1510316‑M2/46‑1 (MQ=255) ccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGagtcca > 2:211934‑M2/30‑76 (MQ=255) ccagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGagtcca < 2:2067383‑M2/47‑1 (MQ=255) cagcagcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGagtccag > 2:611025‑M2/29‑76 (MQ=255) agcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCg < 1:1666415‑M2/52‑1 (MQ=255) agcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCg < 2:1051333‑M2/52‑1 (MQ=255) gcgcggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGa < 1:1009893‑M2/53‑1 (MQ=255) ggctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGt > 1:69738‑M2/20‑76 (MQ=255) gctggagtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTc < 2:1988631‑M2/58‑1 (MQ=255) gcgACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTc < 1:1457680/76‑1 (MQ=255) agtctttcgcggcGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGAc < 1:1212132‑M2/63‑1 (MQ=255) agtctttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGAc < 1:759019‑M2/63‑1 (MQ=255) ttcgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTAt < 1:963254‑M2/68‑1 (MQ=255) cgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATgg > 2:884318‑M2/7‑76 (MQ=255) cgcgacGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATgg < 1:1764142‑M2/70‑1 (MQ=255) cGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAAt > 2:548144‑M2/2‑76 (MQ=255) cGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAAt > 2:1691865‑M2/2‑76 (MQ=255) cGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAAt < 1:483979‑M2/75‑1 (MQ=255) cGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAAt < 1:461578‑M2/75‑1 (MQ=255) cGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAAt < 1:408660‑M2/75‑1 (MQ=255) | CGCTTTTTATCCACCACACTTAAACAACTACGCCAGCAGCGCGGCTGGAGTCTTTCGCGACTGGCAGAAGCGACGGGCGTTTCTAAAGCAATGTTAGGGCAGATTGAGCGTAATGAGTCCAGTCCGACGGTCGCGACATTATGGAAAAT > REL606/1476297‑1476445 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |