Predicted mutation
evidence seq id position mutation annotation gene description
JC JC REL606 3,570,726 IS150 (–) +3 bp intergenic (‑317/‑72) yhiO ← / → uspA universal stress protein UspB/universal stress global response regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? REL606 3570726 =1 (0.020)87 (1.400) 59/146 0.0 98.8% intergenic (‑317/‑74) yhiO/uspA universal stress protein UspB/universal stress global response regulator
?REL606 3651091 = NA (NA)noncoding (1/1443 nt) IS150 repeat region
* ? REL606 = 35707281 (0.020)66 (1.030) 52/150 0.2 98.5% intergenic (‑319/‑72) yhiO/uspA universal stress protein UspB/universal stress global response regulator
?REL606 = 3652533 NA (NA)noncoding (1443/1443 nt) IS150 repeat region

Only 100 of 104 total aligned reads displayed.

TAGTGTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3570800‑3570726
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG  >  REL606/3651091‑3651167
                                                                                                                                                        
TAGTGTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCT                                                                              >  2:842479/1‑76
TAGTGTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCT                                                                              >  2:209097/1‑76
 AGTGTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTG                                                                             <  2:882406/76‑1
 AGTGTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTG                                                                             >  1:424773/1‑76
  GTGTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGT                                                                            <  1:936308/76‑1
   TGTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTA                                                                           <  2:1874972/76‑1
    GTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTAC                                                                          <  2:657298/76‑1
     TTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACT                                                                         <  2:561709/76‑1
     TTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACT                                                                         >  1:294189/1‑76
     TTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACT                                                                         >  1:1733439/1‑76
      TACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTG                                                                        >  2:991671/1‑76
        CTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCA                                                                      <  2:1943140/76‑1
            TTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTTTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCA                                                                  >  1:1266149/1‑76
               CATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTT                                                               <  1:1829707/76‑1
                ATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTT                                                              <  2:958246/76‑1
                ATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTT                                                              >  1:1698963/1‑76
                ATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTT                                                              <  2:1864202/76‑1
                  AAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGT                                                            >  2:628707/1‑76
                  AAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGT                                                            >  2:281988/1‑76
                  AAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGT                                                            >  2:1618116/1‑76
                   AAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTT                                                           <  1:306098/76‑1
                     GTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGG                                                         <  2:759169/76‑1
                     GTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGG                                                         <  2:584969/76‑1
                      TTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGt                                                        >  1:1860513/1‑75
                       TGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGAC                                                       >  2:90868/1‑76
                        GTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGGCG                                                      >  1:238007/1‑76
                        GTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACG                                                      >  1:861914/1‑76
                          CGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGAT                                                    <  2:877671/76‑1
                          CGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGAT                                                    <  1:1262885/76‑1
                            ATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGA                                                  >  1:1335859/1‑76
                             TGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAA                                                 >  2:1663755/1‑76
                             TGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAA                                                 <  1:1898189/76‑1
                              GACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAA                                                >  2:667732/1‑76
                               ACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAAT                                               <  2:1334595/76‑1
                                CTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATG                                              >  1:900197/1‑76
                                CTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATG                                              >  1:500910/1‑76
                                 TGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGG                                             >  1:335166/1‑76
                                 TGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGG                                             >  2:1011443/1‑76
                                  GGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA                                            >  2:374709/1‑76
                                  GGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA                                            <  2:1751004/76‑1
                                  GGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA                                            >  1:1377426/1‑76
                                  GGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA                                            <  1:1999782/76‑1
                                  GGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGA                                            >  2:868686/1‑76
                                    CCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAAT                                          <  2:766171/76‑1
                                     CAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                         <  2:561503/76‑1
                                     CAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                         <  1:475239/76‑1
                                     CAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATA                                         <  1:475256/76‑1
                                      AGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG                                        <  1:100903/76‑1
                                      AGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAG                                        <  1:93078/76‑1
                                       GCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGC                                       <  2:1809578/76‑1
                                        CTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCC                                      >  1:693273/1‑76
                                         TAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCC                                     >  1:1645566/1‑76
                                           GCGTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCT                                   <  2:1613658/76‑1
                                             GTTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAA                                 >  1:577891/1‑76
                                              TTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                >  2:1275263/1‑76
                                              TTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                >  1:1724659/1‑76
                                              TTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAAT                                >  2:1947400/1‑76
                                              TTTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCACCTAAT                                <  1:1024946/76‑1
                                               TTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA                               <  1:2005690/76‑1
                                               TTCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATA                               <  1:573/76‑1
                                                TCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTTGACGATGAAATGGAATAGCCCCTAATAT                              >  1:1313353/1‑76
                                                TCTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT                              <  2:597386/76‑1
                                                 CTTGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATG                             >  2:1630635/1‑76
                                                   TGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCGCTAATATGTC                           <  1:695403/76‑1
                                                   TGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTC                           >  2:1964798/1‑76
                                                   TGTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTC                           >  1:665869/1‑76
                                                    GTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCA                          <  1:1905150/76‑1
                                                    GTGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCA                          <  2:925902/76‑1
                                                     TGCCGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAA                         <  1:1708360/76‑1
                                                        CGTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTCGACGATGAAATGGAATAGCCCCTAATATGTCAAAGC                      >  2:885794/1‑76
                                                         GTTACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCC                     <  1:1575980/76‑1
                                                           TACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA                   >  2:1685276/1‑76
                                                           TACGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAA                   <  1:55106/76‑1
                                                             CGTCACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAA                 <  1:1107491/76‑1
                                                                CACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATAC              >  2:876290/1‑76
                                                                 ACCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACC             <  2:229089/76‑1
                                                                  CCCGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCC            >  2:346854/1‑76
                                                                    CGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTT          >  2:1001982/1‑76
                                                                    CGCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTT          >  1:585591/1‑76
                                                                     GCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT         <  2:355095/76‑1
                                                                     GCGTCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTT         <  1:1944120/76‑1
                                                                        TCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA      >  1:1850014/1‑76
                                                                        TCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA      <  1:1013806/76‑1
                                                                        TCCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGA      >  1:673917/1‑76
                                                                         CCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA     <  1:783623/76‑1
                                                                         CCTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAA     >  2:638858/1‑76
                                                                          CTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAn    <  1:157767/76‑2
                                                                          CTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAA    >  1:670089/1‑76
                                                                          CTGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAA    >  1:538798/1‑76
                                                                           TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA   >  2:947846/1‑76
                                                                           TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA   <  2:554180/76‑1
                                                                           TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA   <  1:310897/76‑1
                                                                           TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA   <  1:1351743/76‑1
                                                                           TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA   >  2:1499785/1‑76
                                                                           TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAA   <  2:2016126/76‑1
                                                                            GTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG  <  1:1437464/76‑1
                                                                            GTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG  <  1:1000932/76‑1
                                                                            GTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG  >  2:1178995/1‑76
                                                                            GTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG  <  2:1445968/76‑1
                                                                            GTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG  >  2:1746199/1‑76
                                                                                                                                                        
TAGTGTTACTCCTTCCATAAAGTTGTCGATGACTGGCCAGCTAGCGTTTCTTGTGCCGTTACGTCACCCGCGTCCtg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  REL606/3570800‑3570726
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATATGTCAAAGCCAAAATACCCTTTTGAAAAG  >  REL606/3651091‑3651167

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.