| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3171156 | 60 (1.120) | 4 (0.090) | 4/130 | 5.7 | 7.3% | intergenic (+42/‑241) | ygjR/ygjT | predicted NAD(P)‑binding dehydrogenase/predicted inner membrane protein, part of terminus |
| ? | REL606 | = 3171165 | 50 (1.080) | intergenic (+51/‑232) | ygjR/ygjT | predicted NAD(P)‑binding dehydrogenase/predicted inner membrane protein, part of terminus | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGA > REL606/3171095‑3171239 | cAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATgg > 2:1130556/1‑76 (MQ=255)cAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATgg > 2:1325758/1‑76 (MQ=255) tAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTg > 2:1395084/1‑76 (MQ=255) tAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTg < 1:250307/76‑1 (MQ=255) aGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGt > 2:1421276/1‑76 (MQ=255) gTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCAt < 2:1088581/76‑1 (MQ=255) tAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATa > 1:658410/1‑76 (MQ=255) tAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATa > 1:1676134/1‑76 (MQ=255) aaaaCTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATAc < 1:930809/76‑1 (MQ=255) aaaCTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACt > 1:148326/1‑76 (MQ=255) aCTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACttt < 2:892513/76‑1 (MQ=255) aCTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACttt < 1:272551/76‑1 (MQ=255) cTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTg < 2:109516/76‑1 (MQ=255) tataATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGt > 2:271742/1‑76 (MQ=255) ataATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGtt > 1:166304/1‑76 (MQ=255) ataATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGtt > 1:986984/1‑76 (MQ=255) ataATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGtt > 1:69589/1‑76 (MQ=255) ataATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGtt < 1:777883/76‑1 (MQ=255) taATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTa > 1:802472/1‑76 (MQ=255) ttGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCt < 1:786824/76‑1 (MQ=255) ttGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCt > 1:202771/1‑76 (MQ=255) ttGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCt > 2:1648230/1‑76 (MQ=255) tGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTg > 2:1175436/1‑76 (MQ=255) tGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTg < 2:1358270/76‑1 (MQ=255) gCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGc > 2:811601/1‑76 (MQ=255) ccAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCa < 1:846471/76‑1 (MQ=255) aaaGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCaaa < 1:456869/76‑1 (MQ=255) aaGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAg > 2:83716/1‑76 (MQ=255) gTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAggg > 1:1168711/1‑76 (MQ=255) gTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAggg > 1:1662050/1‑76 (MQ=255) tAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAgngg < 2:1216761/76‑1 (MQ=255) tAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAgggg < 2:405402/76‑1 (MQ=255) tAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAgggg < 2:176887/76‑1 (MQ=255) aaaaCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGa > 2:79026/1‑76 (MQ=255) aaCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGt < 1:1272372/76‑1 (MQ=255) aCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTa < 1:834111/76‑1 (MQ=255) aCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTa < 2:890194/76‑1 (MQ=255) aCAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTa < 1:1467518/76‑1 (MQ=255) tAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCa > 1:975652/1‑76 (MQ=255) aaaGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCAtt > 2:1027045/1‑76 (MQ=255) aaGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTg < 1:1067048/76‑1 (MQ=255) aaGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTg < 1:1220035/76‑1 (MQ=255) aGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGc > 2:688871/1‑76 (MQ=255) tATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCgg < 2:1562175/76‑1 (MQ=255) gTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCg > 1:402466/1‑76 (MQ=255) gTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCg > 2:286028/1‑76 (MQ=255) gTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCg > 2:814597/1‑76 (MQ=255) tAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTCCCTGCAAAGGGGAGTAACTTCATTGCCGGTCGa < 2:1552279/76‑1 (MQ=255) tAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGa > 1:1627267/1‑76 (MQ=255) cATTGACTGGCTGAATGTTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCAtt < 2:1238794/76‑1 (MQ=255) ttGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTAc < 2:1393041/76‑1 (MQ=255) ttGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTAc < 2:1071822/76‑1 (MQ=255) tGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACg < 1:589355/76‑1 (MQ=255) ggCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGAtgtg > 2:1294655/1‑76 (MQ=255) tGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGa > 1:469950/1‑76 (MQ=255) | CAGATAGCGTAAAACTATAATTGCCAAAGTAAAACAGTGTAAAAGGTATGTAACAGACCATTGACTGGCTGAATGGTCTGTCATACTTTGTTACCTGCAAAGGGGAGTAACTTCATTGCCGGTCGATCGTCATTACGATGTGTGA > REL606/3171095‑3171239 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |