Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	REL606	2032762–2032783	2056037–2055885	23103–23276	25 [20]	[20] 22	[manB]–[cpsG]	[manB],manC,insB‑14,insA‑14,wbbD,wbbC,wzy,wbbB,wbbA,vioB,vioA,wzx,rmlC,rfbA,rfbD,rfbB,galF,wcaM,wcaL,wcaK,wzxC,wcaJ,[cpsG]

TTTTCGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAGTTTCCCGCGAATATCATAAGCTTTAA  >  REL606/2032686‑2032784                                                                            |                        ttttCGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAAttt                         <  1:1901586/76‑1 (MQ=255) ttttCGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAAttt                         >  1:222342/1‑76 (MQ=255) ttttCGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAAttt                         >  2:191996/1‑76 (MQ=255)  tttCGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAAtttt                        <  2:1032011/76‑2 (MQ=255)   ttCGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAAttttc                       >  2:635991/1‑74 (MQ=255)    tCGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTGAGTTCTTCGCCTAATTTtcc                      <  2:1598280/76‑1 (MQ=14)     cGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATGTTCATTCAGTTCTTCGCCTAATTTtcca                     >  1:1113302/1‑75 (MQ=11)     aggTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAGTTTCCcg                     >  1:1219216/2‑76 (MQ=255)       gTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCcacg                   <  1:1991951/76‑1 (MQ=11)       gTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCcacg                   >  2:1512598/1‑76 (MQ=11)       gTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCcacg                   >  2:1072324/1‑76 (MQ=11)         ttGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGaa                 >  1:1953900/1‑76 (MQ=11)         ttGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGaa                 >  1:831719/1‑76 (MQ=11)          taagaAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAat                <  2:209221/74‑1 (MQ=11)          tGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAat                >  1:704963/1‑76 (MQ=11)          tGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAat                >  2:885915/1‑76 (MQ=11)          tGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAat                >  1:1240070/1‑76 (MQ=11)          tGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAat                <  1:1195033/76‑1 (MQ=11)            agaAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAatat              <  2:1985549/76‑1 (MQ=11)             gaAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAATATc             >  1:1151080/1‑76 (MQ=11)              aaaTTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAATATCa            <  2:397413/76‑1 (MQ=11)              aaaTTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAATATCa            <  2:397430/76‑1 (MQ=11)                aTTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAATATCATa          <  1:247266/76‑1 (MQ=11)                 ttCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAATTTTCCACGAATATCATag         <  1:508252/76‑2 (MQ=11)                        tAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAGTTTCCCGCGAATATCATAAGCTTTaa  >  1:306409/1‑76 (MQ=255)                                                                            |                        TTTTCGGTTTGAGAAATTCGCCATAGGCACGCCCAATGCGCCAGGCGATATCTTCATTCAGTTCTTCGCCTAGTTTCCCGCGAATATCATAAGCTTTAA  >  REL606/2032686‑2032784

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑