| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 3021736 | 67 (1.060) | 4 (0.070) | 3/138 | 8.0 | 7.0% | coding (949/1140 nt) | ECB_02821 | hypothetical protein |
| ? | REL606 | = 3021921 | 44 (0.760) | coding (764/1140 nt) | ECB_02821 | hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATG > REL606/3021661‑3021810 | atatCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATAtt < 1:85599/76‑1 (MQ=255)atatCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATAtt > 1:535614/1‑76 (MQ=255) atCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCt < 1:983763/76‑1 (MQ=255) cATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTta > 2:41986/1‑76 (MQ=255) cATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTta < 2:1956402/76‑1 (MQ=255) cATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTta < 2:1893108/76‑1 (MQ=255) aTGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTtat < 1:135574/76‑1 (MQ=255) gTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaa > 2:967180/1‑76 (MQ=255) gTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaa < 2:778901/76‑1 (MQ=255) gTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaa < 1:1928388/76‑1 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa < 1:735349/76‑1 (MQ=255) aaTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATaaaa > 1:718070/1‑76 (MQ=255) aTCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAAc < 1:361522/76‑1 (MQ=255) tCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACg > 1:451770/1‑76 (MQ=255) cAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACgg < 1:54676/76‑1 (MQ=255) cAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACgg > 1:1976474/1‑76 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACgga > 2:133492/1‑75 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgc < 2:1182250/76‑1 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgc < 2:1182233/76‑1 (MQ=255) aaTTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgc < 2:758891/76‑1 (MQ=255) ttATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcag < 1:1173107/76‑1 (MQ=255) ttATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcag > 2:1296369/1‑76 (MQ=255) atatCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGgcagca > 2:1632107/1‑76 (MQ=255) tatCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCAt > 1:355921/1‑76 (MQ=255) tCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTc < 1:364718/76‑1 (MQ=255) cATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt < 1:1975778/76‑1 (MQ=255) cATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt < 1:1975811/76‑1 (MQ=255) cATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCt > 1:43102/1‑76 (MQ=255) ttAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCttt < 1:1670417/76‑1 (MQ=255) tAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCtttt > 2:1836993/1‑76 (MQ=255) aGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTg > 2:1904054/1‑76 (MQ=255) aGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTg < 2:1844168/76‑1 (MQ=255) gggCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCttttca < 2:835856/76‑3 (MQ=255) gggCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTgg > 2:1701525/1‑76 (MQ=255) gCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTgggg < 2:860554/76‑1 (MQ=255) gCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTgggg < 1:1321031/76‑1 (MQ=255) cATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGa < 1:1638953/76‑1 (MQ=255) cATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGa < 1:1461732/76‑1 (MQ=255) tgatgGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCCGCATTCTTTTGGGGata > 1:1112425/1‑76 (MQ=255) atgGAATACTTGAACTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATg < 1:92474/76‑1 (MQ=255) tgGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGt > 2:110747/1‑76 (MQ=255) gAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTAt < 1:1928730/76‑1 (MQ=255) aaTACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTAtt < 1:1296303/76‑1 (MQ=255) aaTACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTAtt > 1:482892/1‑76 (MQ=255) aaTACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTAtt < 1:1799552/76‑1 (MQ=255) tACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGGTATGTATTCt > 1:1049359/1‑76 (MQ=255) tACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGCTCTGTATTCt > 1:426973/1‑76 (MQ=255) ttGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTc < 1:1985087/76‑1 (MQ=255) ttGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTc < 2:1624414/76‑1 (MQ=255) gAATTACGCACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCg < 1:819331/76‑1 (MQ=255) gAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCg > 1:1522437/1‑76 (MQ=255) gAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCg > 1:49809/1‑76 (MQ=255) tACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCtt < 2:274217/76‑1 (MQ=255) tACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCtt < 2:274197/76‑1 (MQ=255) acacacCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTg < 2:1534696/76‑1 (MQ=255) accTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCtt < 1:1632108/76‑1 (MQ=255) ccTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCttt < 2:1318357/76‑1 (MQ=255) ccTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCttt < 1:1391864/76‑1 (MQ=255) ataaaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTAc < 1:674428/76‑1 (MQ=255) tcgatatTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGc > 2:1717198/4‑76 (MQ=255) aaaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGc > 1:152579/1‑76 (MQ=255) aaaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGc > 1:260426/1‑76 (MQ=255) aaataTTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCt < 1:127975/76‑1 (MQ=255) atatTCTTATAAAACGTCAGCATTCTTTTGGTGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTAc < 1:1661737/76‑1 (MQ=255) tatTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACa < 1:487861/76‑1 (MQ=255) tatTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACa > 2:1996229/1‑76 (MQ=255) tatTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACa < 1:487849/76‑1 (MQ=255) tatTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACa > 2:787381/1‑76 (MQ=255) ttCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATg > 1:1742381/1‑76 (MQ=255) | ATATCATGTAATCAATTATATCATTAGGGCATGATGGAATACTTGAATTACACACCACCTTATCAAATAAAATATTCTTATAAAACGGCAGCATTCTTTTGGGGATATGTATTCTTTCCGCCTTGTTTTCTTTTAGCACTACGCTACATG > REL606/3021661‑3021810 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |