| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | REL606 | 4,097,564 | Δ4 bp | coding (6‑9/846 nt) | glpF ← | glycerol facilitator |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | REL606 | 4097564 | 4097567 | 4 | 50 [0] | [0] 51 | glpF | glycerol facilitator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | REL606 | = 4097563 | 0 (0.000) | 49 (0.780) | 34/150 | 1.0 | 100% | coding (10/846 nt) | glpF | glycerol facilitator |
| ? | REL606 | 4097568 = | 0 (0.000) | coding (5/846 nt) | glpF | glycerol facilitator | |||||
CGCAACCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTTTGACTCATAATCGGATCCTGAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCT > REL606/4097488‑4097634 | cgcaacCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGt > 1:1259777/1‑76 (MQ=255) gCAACCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTc > 2:435715‑M1/1‑75 (MQ=255) cAACCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTct > 2:886940‑M1/1‑74 (MQ=255) cAACCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTct < 1:1340384‑M1/76‑3 (MQ=255) cAACCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTct > 2:1788100‑M1/1‑74 (MQ=255) cAACCCACACCGAAGAAAATCAACAACCCGGAACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATTTct > 2:886953‑M1/1‑74 (MQ=255) aaCCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctc > 2:1033795‑M1/1‑73 (MQ=255) aCCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctca < 1:601043‑M1/76‑5 (MQ=255) aCCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctca > 1:284951‑M1/1‑72 (MQ=255) cacaCCGAAGAAATTCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataa < 2:939459‑M1/76‑8 (MQ=255) cacaCCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataa < 1:1666369‑M1/76‑8 (MQ=255) acacCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataat > 2:540476‑M1/1‑68 (MQ=255) cacCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatc < 1:1870099‑M1/76‑10 (MQ=255) cacCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatc < 1:1183520‑M1/76‑10 (MQ=255) ccGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcgg < 1:1531313‑M1/76‑12 (MQ=255) agaaAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcc < 1:1846278‑M1/76‑16 (MQ=255) aaaaTCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAGGGTTGATGTctcataatcggatcctg > 1:543197‑M1/1‑59 (MQ=255) aaaaTCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctg < 1:1998001‑M1/76‑18 (MQ=255) aaaaTCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctg < 2:168977‑M1/76‑18 (MQ=255) aaaaTCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctg < 2:1388638‑M1/76‑18 (MQ=255) caacCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagtta > 2:1438334‑M1/1‑51 (MQ=255) caacCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagtta > 1:1406809‑M1/1‑51 (MQ=255) acCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaat < 2:70381‑M1/76‑28 (MQ=255) ggTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgttt < 2:1084770‑M1/76‑32 (MQ=255) ccGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttg > 1:1299249‑M1/1‑41 (MQ=255) cGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgt > 1:1821815‑M1/1‑40 (MQ=255) gAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgta > 2:1375455‑M1/1‑39 (MQ=255) gAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgc < 2:1116403‑M1/76‑41 (MQ=255) ttCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtg < 1:167333‑M1/76‑44 (MQ=255) ttCAGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtg < 1:1170557‑M1/76‑44 (MQ=255) aGCAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaa > 2:1758607‑M1/1‑30 (MQ=255) cAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagt < 2:227478‑M1/76‑49 (MQ=255) cAATGCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagt < 1:1033796‑M1/76‑49 (MQ=255) gCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacg < 1:599290‑M1/76‑53 (MQ=255) gCACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacg > 2:252781‑M1/1‑24 (MQ=255) cACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacgg < 1:933257‑M1/76‑54 (MQ=255) cACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacgg < 1:875150‑M1/76‑54 (MQ=255) cACTGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacgg < 1:292497‑M1/76‑54 (MQ=255) tGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacc > 2:1303774‑M1/1‑20 (MQ=255) tGGCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacc > 1:889704‑M1/1‑20 (MQ=255) ggCCTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtaaaagtcacggacct < 1:1421497‑M1/76‑58 (MQ=255) cTTTCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctcca < 2:1484309‑M1/76‑61 (MQ=255) tCAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctccacga > 1:234478‑M1/1‑13 (MQ=255) cAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctccacgat > 1:1497614‑M1/1‑12 (MQ=255) cAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctccacgat > 1:1438668‑M1/1‑12 (MQ=255) cAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctccacgat > 1:332766‑M1/1‑12 (MQ=255) cAAGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctccacgat > 1:1432641‑M1/1‑12 (MQ=255) aaGGTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctccacgatg > 2:122865‑M1/1‑11 (MQ=255) gTTGATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctccacgatgctt < 2:451508‑M1/76‑69 (MQ=255) gATGTctcataatcggatcctgaagagttaatgtttgttgtatgcgtgaaagtcacggacctccacgatgcttgta < 1:1502715‑M1/76‑72 (MQ=255) | CGCAACCCACACCGAAGAAAATCAACAACCCGGTACCGAGGAATTCAGCAATGCACTGGCCTTTCAAGGTTGATGTTTGACTCATAATCGGATCCTGAAGAGTTAATGTTTGTTGTATGCGTGAAAGTCACGGACCTCCACGATGCT > REL606/4097488‑4097634 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |